| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2006 |
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| Symbol | |
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| ID | 3739878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2244290 |
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| End bp | 2245477 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637779300 |
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| Product | cysteine desulphurases, SufS |
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| Protein accession | YP_384960 |
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| Protein GI | 78223213 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC AGAAAATCAG GGGAGATTTC CCCATCTTTG AGAGGCGCAT CAACGGGAAG
CCGATAGTCT ATTTCGACAG CGCCGCCACG ACCCAGAAGC CTCGCCAGGT GATCGATACG
CTTTCGAACT ACTACGCGAA CCACTGCGCC AATATCCACC GCGGGGTGCA CACCCTTTCC
CAGGAGTCGT CGGAGCTCTA TGAGGAAGCG CGCCGGACCG TTGCCCGTTT CATCAATGCC
GACGAGCGGG AAATCGTCTT TGTCAGGAAC ACGACCGAAG CGATCAATCT GGTAAGCACC
TGCCTGAAGG GGGAGGGGCA GATTCTGTCC ACCGTTACCG AGCACCACTC GAATCTCCTT
CCGTGGGGAC GTTCACGGAA GGTAGACTAT GTGGATATCG ACGCCCAGGG GCGGATAGAT
GTGGCGGATC TGAAGGAAAA ATTGCTGAAA CCGACGCTCC TGGTCGCGGT GACCCACGTC
TCCAACGTAC TTGGTCTGGT CAATCCGGTG GAAGAGGTGA TAGCCGAGGC GCGGAAAAAC
GGGGCGCTGA CACTGGTTGA TGCGGCCCAG TCGGCGCCGC ACATGGAGAT CGACGTCAAG
GCGATGGGAT GCGATTTCCT GGTTTTCAGC GGGCACAAGA TGCTGGCGCC CTCGGGTATC
GGCGTCCTCT ATGTGCGGGA AGAGCTCTAT GAGCGGATGG AACCGTATCT CATGGGGGGG
AGCACCATCA AGGAGGCCCA CCTGGGAAGT TATGTTCCTG AGGAACCCCC CACCTGCTAT
GAGGCGGGAA CGCCCAACAT CGAGGGTGCT ATTGCGCTGG CCAGCGCCAT CGACTACCTG
AACGACATCG GCATGGACAA CGTGCTGGCC CACGACAAGG CCTTGATGGC GTTGGCCCTG
GAGAGGATGA AGGCCATCGA CAATGTAGAA CTATACGGCA GCCTCGATCC CACGGACCGG
CTCTCCGTCA TCACCTTCAA TGTCAAGGGG ATGGGGTGCC ACGGCGTGGC CAAGGTGCTG
AACCTGCGGG AGAACATCAT GATCCGCTCG GGCTTCCACT GCGCTCAACC GCTCCATGAC
CGGCTCGGCA TCGGGCCGAC GGCGCGGATG TCCTTCTATA TCTACAATAC GCCTGAAGAG
ATCGAGCTTG CGGCGGAGCT TCTCGGGAAG ATTGCGGAGT TTATGTGA
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| Protein sequence | MDIQKIRGDF PIFERRINGK PIVYFDSAAT TQKPRQVIDT LSNYYANHCA NIHRGVHTLS
QESSELYEEA RRTVARFINA DEREIVFVRN TTEAINLVST CLKGEGQILS TVTEHHSNLL
PWGRSRKVDY VDIDAQGRID VADLKEKLLK PTLLVAVTHV SNVLGLVNPV EEVIAEARKN
GALTLVDAAQ SAPHMEIDVK AMGCDFLVFS GHKMLAPSGI GVLYVREELY ERMEPYLMGG
STIKEAHLGS YVPEEPPTCY EAGTPNIEGA IALASAIDYL NDIGMDNVLA HDKALMALAL
ERMKAIDNVE LYGSLDPTDR LSVITFNVKG MGCHGVAKVL NLRENIMIRS GFHCAQPLHD
RLGIGPTARM SFYIYNTPEE IELAAELLGK IAEFM
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