| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1958 |
|---|
| Symbol | |
|---|
| ID | 3740138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2183532 |
|---|
| End bp | 2184119 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637779252 |
|---|
| Product | condensin subunit ScpB |
|---|
| Protein accession | YP_384912 |
|---|
| Protein GI | 78223165 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0110905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAATC TTAAGTCCAT TGTCGAAAGC CTCCTGTTCG TTGCCGATGC CCCGATGACC
TTCGACCGTC TCTGCTCCTT CCTTGATGAG TTTGACCGGG GAGATATTCG GGAGGCACTG
GGCGCGCTTC AGGAGGAGTA CGGACAGGAA GGGAGGGGAG TTGTGCTGGT TGAGGTGGCT
TCCGGTTACC AGTTCCGCAC CCCCGTAGAA AATGCCGACT ACCTTCGGCG CCTCACAAAA
ACCAGGCCAG TCAAATTCAG CCAGTCCGCC CTTGAAACCC TTGCCATCAT CGCCTACCGC
CAACCGGTGA CCCGTGCCGA AATCGAGTAT CTGCGCGGAG TCGATTGCGG CGGCGTCCTG
AAGACCATCC TGGAAAAGAA ACTCATCAAG ATTCTCGGGA AGAAAGACAT TCCGGGAAAA
CCGCTCATTT ACGGTACCAC GCGGGAGTTC CTTGAACTCT TCAGCCTCAA AGACCTCAGG
AGCCTGCCAA CCCTCAAGGA AATTCGCGAC CTGTCGGAAA CTGCTTCCTA CGAACAACAG
GAGGAACTCC CGCTGGAGCA GCCCGAGGAT GACAGGGAGC TTTTGTAA
|
|---|
| Protein sequence | MPNLKSIVES LLFVADAPMT FDRLCSFLDE FDRGDIREAL GALQEEYGQE GRGVVLVEVA
SGYQFRTPVE NADYLRRLTK TRPVKFSQSA LETLAIIAYR QPVTRAEIEY LRGVDCGGVL
KTILEKKLIK ILGKKDIPGK PLIYGTTREF LELFSLKDLR SLPTLKEIRD LSETASYEQQ
EELPLEQPED DRELL
|
|---|
| |