| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1739 |
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| Symbol | |
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| ID | 3741415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1955415 |
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| End bp | 1956572 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637779024 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_384695 |
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| Protein GI | 78222948 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.558289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGCCA AGACCGCCCT CATATACTCG AACGACTTCA GCCGGTTCAG TTACGGTGAC
GACCATCCGT TCAAGATCCA GCGTATCATT CTTGCCCGCG AGCTCATGGG CATGCTGGGA
CTCACGGAGT TGCCCGGCGC TTGTATCCAT GACTGCCCGC GTGCGGACGA GGCATCCCTT
CTCACGTTTC ATTCCCCGGA CTATCTACAG CGGCTCCGGG AATTCAGCGA TTCCGACGAA
CCTCGCGCAG ACTTCCGGTA TGGTCTGGGA GATCTGGACA ACCCGGTCTT CAAGGGATTC
TATGACTGGG CAATACTCGG CGTCGGAGGG ACCATGGAGG CCGCCCGACT CGTGACCGAG
GAGGGGTACG ACATCGCCTT CACCATGGCA GGGGGGTGGC ACCACGCCCA CCGGAGCAAG
GCATCGGGTT TCTCGTATCT GAATGACGCA GTTATCGCCA TTAACACGCT TGTTGCGAAG
GGATTGCGGG TTGCGTACCT GGACATCGAC GCCCACCACG GCGACGGGGT TCAGGAGGCC
TTTTACGATA CCGACCAGGT CCTGACCGTC TCTATCCACG AGAGCGGCAT CTATTTTTTC
CCCGGCACCG GCTTCGAGGA CGAGATCGGT AGGGGGCAGG GGAGGGGATA CTCGGTGAAT
GTTCCCCTCG TGGCCCACAC CGACGACGCT CTGTTCATGA AGGCCTTTGA CGAAGTGGCC
TATCCCCTGA TCGCCGCCTA CAACCCCGAT GTTCTGGTAA CCCAACTCGG CGTTGACACG
TTTCGCACCG ACCCCCTCAC GCGCCTCGAA ATAACCACCC ACAGCTACAC CTATATCCTG
CGCAAGCTGA AGGCGCTGAA AATTCCGTGG GTGGCAGTGG GTGGCGGCGG ATATAACATG
ATCAACGTTG CCCGGGGATG GACCCTTGCC TGGGGGATCA TGAACGGCGT GGAACTGCCG
CCGAAGCTGC CGGCCCAATT CGTGGATATG ATCGCGCCCA TGGGACATCC GAACCGGATG
CTTCTTGACG CCATGCACTG GGCAGAGGAG GATGACCGGA ACCGGGCCCT CGACGCGGTG
GAGAGGAGTA TCGCTGCCAT TCGGGAAACG GTCTTTCCCG TGATTATCGG AAATTATGCC
GCGGCTGCCG GGGAATAG
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| Protein sequence | MPAKTALIYS NDFSRFSYGD DHPFKIQRII LARELMGMLG LTELPGACIH DCPRADEASL
LTFHSPDYLQ RLREFSDSDE PRADFRYGLG DLDNPVFKGF YDWAILGVGG TMEAARLVTE
EGYDIAFTMA GGWHHAHRSK ASGFSYLNDA VIAINTLVAK GLRVAYLDID AHHGDGVQEA
FYDTDQVLTV SIHESGIYFF PGTGFEDEIG RGQGRGYSVN VPLVAHTDDA LFMKAFDEVA
YPLIAAYNPD VLVTQLGVDT FRTDPLTRLE ITTHSYTYIL RKLKALKIPW VAVGGGGYNM
INVARGWTLA WGIMNGVELP PKLPAQFVDM IAPMGHPNRM LLDAMHWAEE DDRNRALDAV
ERSIAAIRET VFPVIIGNYA AAAGE
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