Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1679 |
Symbol | |
ID | 3740529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1886800 |
End bp | 1887492 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637778964 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_384635 |
Protein GI | 78222888 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000101055 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGTAC TCCAGGCTTC AGTCGGATAT TTGGGGAAAA ATATCGAAAA TGATGTGGAA ACAGTCCAAA GCCTCCTGAA GTCCAAGGGC TTTGACCCAA AGGGGATTGA TGGCGTTTGC GGCAAGGACA CCATCGCGGC GATACGCAGC TTCCAGGCCA CGTTCATGAC GAACCCCGAC GGGCTCATAG AACCGGGGCG CAAGACCTGG CTCAAACTTG CGGGCACGGG TGGCGCAGCC ACTGCCGATC TTTCCCCGTG GTGCGGCGAC AGCGCCCGAT GGTCCCAAGA GAAGAAACTC CAGAGCATGC ATCCGGAACT GCGCCAGAAG GTTGCAGCGG TTCTGCAGGC GCTCGCCGGA CGCGGCTTCC AGCCGAAGGT TTTTTATGGC TGGCGCTCGG TGGCGGTCCA GATGCAGCTC TACTATCAGG GGAACAGCAA GGTGAAGTTC AGCTTCCACA ACGCCCAGCA TCCCGACGGA ATCCCCAACG CCTATGCGGC AGATATTGTG GACAGCCGCT TCGGCTGGGC TCCGGAGGCG GAACAGACGG GATTCTGGAA AGCCCTTGGC GAGGAGGCCA AGGAACTGGG CCTCGTCTGG GGAGGGGACT GGGTGAATTT CCGCGACTGG GCCCACGTAC AGCTGGTGCC TAATGATGAA CTTGGCCGGG TCAAACGGGA GAGCGGCCTG TGA
|
Protein sequence | MSVLQASVGY LGKNIENDVE TVQSLLKSKG FDPKGIDGVC GKDTIAAIRS FQATFMTNPD GLIEPGRKTW LKLAGTGGAA TADLSPWCGD SARWSQEKKL QSMHPELRQK VAAVLQALAG RGFQPKVFYG WRSVAVQMQL YYQGNSKVKF SFHNAQHPDG IPNAYAADIV DSRFGWAPEA EQTGFWKALG EEAKELGLVW GGDWVNFRDW AHVQLVPNDE LGRVKRESGL
|
| |