| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1654 |
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| Symbol | |
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| ID | 3740504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1859653 |
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| End bp | 1860510 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637778939 |
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| Product | HhH-GPD |
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| Protein accession | YP_384610 |
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| Protein GI | 78222863 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000000331061 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.759743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCTGG AAAGCCACAT CAGGGAAATG TATACCTCCG GGGGACTCAC CCCGGAGGCT
GCCACCCTCT TCCGACAGAT TGTTTATGGC CACTACCGGC GCCACGGGCG CACCCTTCCG
TGGCGTGAAA CCAGTGACCC CTACGCCATC CTCGTTTCCG AGATAATGCT TCAGCAAACC
CAGGTCGACA GGGTGACAGG TAAGTATATG TCATTCCTTT CGGCGTTCCC CGATTTCAGG
GCCCTTGCCG CAGCCCCACT TGACGCGGTT CTTGCCGCCT GGCAAGGGCT CGGCTACAAC
CGGCGCGCCC TCAATCTGAA GCGGTGCTCC GAAGCAGTCG TAACAGAATA TGGCGGCACC
CTTCCCTCCA CCATCGCGGA ACTGGAAAAG CTCCCCGGCA TAGGACACTA CACAGCACGA
GCCGTGGCTG CCTTTGCCTT CTCCGTGCCT TCCGCATTCA TCGAAACCAA CATCAGAACC
GTTTTCATCC ATCACTTCTT CAATGATTCC GAAAAGGTCC ATGACCGCGA GATCGCACCC
CTGGTCGAAG GGGCTCTCGA TTATGGCAAT CCCCGGGAAT GGTATTATGC CCTCATGGAC
TACGGTGCCC ACCTCAAGAG GCTCCACGGC AATCCTTCAC GGCGCAGTGC CCATCACGCA
ACCCAGAGCC CCTTCAAGGG ATCCAATCGG GAACTACGGA GCCTGATACT TAAGGCAATA
CTGGACAGAC CAGGCATAAC GCTTGAAGAA ATTACGTCTT TTCTGAACAA GCCCCAGGAT
GCGGTGCTGA GCAACCTGAA GCAGATGGAA GCAGAAGGGT TTATCGCGAA GAGGAAGGGA
CGACTCTTTA TCGCTTGA
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| Protein sequence | MSLESHIREM YTSGGLTPEA ATLFRQIVYG HYRRHGRTLP WRETSDPYAI LVSEIMLQQT
QVDRVTGKYM SFLSAFPDFR ALAAAPLDAV LAAWQGLGYN RRALNLKRCS EAVVTEYGGT
LPSTIAELEK LPGIGHYTAR AVAAFAFSVP SAFIETNIRT VFIHHFFNDS EKVHDREIAP
LVEGALDYGN PREWYYALMD YGAHLKRLHG NPSRRSAHHA TQSPFKGSNR ELRSLILKAI
LDRPGITLEE ITSFLNKPQD AVLSNLKQME AEGFIAKRKG RLFIA
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