| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1636 |
|---|
| Symbol | |
|---|
| ID | 3740405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1834989 |
|---|
| End bp | 1835696 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637778920 |
|---|
| Product | TonB-like |
|---|
| Protein accession | YP_384592 |
|---|
| Protein GI | 78222845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.484992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCATC ACCCGCACTT GCACAGGCCC GCCAGGACTC TGTTCGTCGG AACGTTAGTC
CTCTCGCTGG CGCTACACCT CTCTTTTGCC GCACTCGCAT CACTCTTCCC CGGCCGTCTT
ACCGGCCTCG CGTCGGAGTC GATCGTCATG GTGGATCTTA CGGATGCCGC CGCCCCACTG
ACAAAGCCCC CGGTGGGAGC AACAGCCGTT CAGCGACCTG TCTCACCGGC CCAGAAACAG
ATGGTGCTCC CCACGCATGA AGAAAAAGCC CTTCCCGAGC CTTCGCCGAC GCCCATGGAG
GAACTTCCTC CTCCGGTGCC CCCTCAAACC AGTGTTTCTT CCCTTTCTGA CGGCCTTACC
CGGGGATTTT TCAGGAGCCT TGCCGACGGA GAAACTCTGC GCGGCGATGT GCGGGAGTAC
TATTTTGAGC TTGTGGAGCG GGTTAACGAA CAGTGGTGGG ATGCGGCGAG CGGTACTGGC
ATGGAACCGG GACGGCAGGA GGCCCTCGTT ACGATTACCG TGAGAAAAAA CGGGGAACTT
CTGGATGTGC GGCTGATTAG AAGCTCAGGC AATGATCAGT ACGACCGGCT GATCATGGAT
ACCCTTCAAG CAGCGTCCAA TCTCCCTCCA CTGCCGGACA GCTACCCCGG GGAGTTCTTT
CAGGCCCCCT TGCGCCTCAT GGCCCCCCGA GGCCTCCTCT TTTCGTAA
|
|---|
| Protein sequence | MEHHPHLHRP ARTLFVGTLV LSLALHLSFA ALASLFPGRL TGLASESIVM VDLTDAAAPL
TKPPVGATAV QRPVSPAQKQ MVLPTHEEKA LPEPSPTPME ELPPPVPPQT SVSSLSDGLT
RGFFRSLADG ETLRGDVREY YFELVERVNE QWWDAASGTG MEPGRQEALV TITVRKNGEL
LDVRLIRSSG NDQYDRLIMD TLQAASNLPP LPDSYPGEFF QAPLRLMAPR GLLFS
|
|---|
| |