9 homologs were found in PanDaTox collection
for query gene Gmet_1636 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_1636  TonB-like  100 
 
 
235 aa  471  1e-132  Geobacter metallireducens GS-15  Bacteria  normal  0.484992  normal 
 
 
-
 
NC_002939  GSU1699  TonB-dependent receptor, putative  41.91 
 
 
237 aa  179  4e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2072  hypothetical protein  37.17 
 
 
246 aa  137  1e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.105388  n/a   
 
 
-
 
NC_011146  Gbem_1323  hypothetical protein  41.41 
 
 
245 aa  113  2.0000000000000002e-24  Geobacter bemidjiensis Bem  Bacteria  normal  0.329029  n/a   
 
 
-
 
NC_012918  GM21_2960  hypothetical protein  41.41 
 
 
245 aa  112  3e-24  Geobacter sp. M21  Bacteria  n/a    normal  0.999469 
 
 
-
 
NC_008554  Sfum_0754  TonB family protein  26.76 
 
 
317 aa  50.4  0.00003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.278027  normal 
 
 
-
 
NC_013223  Dret_1586  TonB family protein  29.49 
 
 
276 aa  48.5  0.00009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2568  TonB-dependent receptor, putative  30.3 
 
 
197 aa  46.2  0.0004  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2211  TonB family protein  30.26 
 
 
274 aa  43.1  0.004  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.00000000585223  n/a   
 
 
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