Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1457 |
Symbol | |
ID | 3740478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1626860 |
End bp | 1628527 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637778743 |
Product | surface antigen (D15) |
Protein accession | YP_384416 |
Protein GI | 78222669 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTA TATTTCCGCC GATACCCGAC CGGTTGCGGC CCCTGCTTCG TATTGCCTTC ATGTGTGGGA TCCTCGCCAC TCTGCCGATT CTCTGCGATG TGTATGCCGC CGACGAGCCC CCTGCCGCCC GGGACGAAGC ACGCCCGGAA GAGGCCGCGG AGCCGGCGGC AACCTCCGCT CCCGCCCCCG CGGAACAGCC GGTAACTTTT GCGATTACCA CCATACTGGT GGAGAGGAAT ACCCTTTTCG CTTCGGACAG ATTGCAGGAG GTGATGGCCC CCTTCGTGGG TGACGGCAAG ACCGCCGATG ACGTGGAAAA GGCCCGGGAA GCGCTGGAGA AATTCCACCA CGATCAGGGC TATCCGACGG TGATCGTGAA CATCCCCGAG CAGTCGGTGG AGGAAGGGAT TATCCGGCTA CAGGTGGTCG AGCAGCGGAT CAATACGGTT ACTGTCACGG GTAACCGTTA TTTTTCACGG GAAATGATCC TAGGAAAATT CCCCTCGCTC CAACCCGGCG GGATCCCCCA TGTTCCGACC CTCCAGGCCG AGTTCACCAA GGCGGGACGG AATCCGGACC TCAAGATCAC GCCGGCCATG GCGCCTTCCA GGGAAGTGGG GTATGTGGAC GTGGAGCTGA AGATAGAGGA GAAGCTTCCC CTGCACGGCA GCCTGGAGCT GAACAACCGG TCGAGCCACG ACACCTCCGC CCTGCGGCTC AATGGAGCCA TCCGCTACGA CAACCTCTGG CAGCGGGAGC ACTCCGTCGG GCTCCAGTAC CAGACCGCAC CCGAGAAAAC ACGGGAGGTC CAGATCCTCT CCGGCTCCTA CGTCCTTCCC GATCCGTGGC ATGACGACCG GCGGATCGTC TTCTACGGCG TCTGGTCCGA TACCAATACC TTTGCGTCCC TTGGGGATAT GCAGGTTCTC GGTAAGGGAA TCATCGTGGG TGGGCGGTAC CTGATTCCGC TTGCAGGCAA GGGCCTTTAC AACCACAGCG CCACCCTGGG CATCGACTAC AAGAGGTTTG ACGAGAGTGC CGGGTTCAAA ACTCGCGTAA GTTACCTGCC GCTGTCAACG GCCTACGATG CGTCGCTTCA GGATTCCACC GGGTACACCC TCTTCAACGC CGGTCTCAAT TTTGCTTTCC GGGGCGCGGT GACGGACCAG TCGGAAATGG CCGTCAAGCG CTCCGAAGCC AAGGGTAACT ATCTGGCCGC CATCCTTGGG CTGGAACGGC AGCAGAAGCT TCCCCTCGGC ATGGGGCTCC GCGCGCGGAT TGACGGACAG CTCTCCAGCG AACCGCTTAT CCCCAACGAG CAGTTCGTGG CCGGCGGCAT GGACAGCGTG CGGGGGTACA AGGAGAGCGA GGCCCTGGGC GATAACGGCT TCCATGGCAC CGTTGAGCTT CGGGTGCCTG ACATTACTCT GGGAAGCGCC ATGAGCATGA CCCCCTACGT TTTTTACGAC ATGGCAGCCG TCGAGCTGAA AAAGCCCCTT CCCGGCGAGA ACCGCAGCCA GACCCTCCAG GGCACCGGGG CCGGCGTGCG GGGGATGCTG TTCAAGTTCC TCGAATACCA GGTCGATTTC GCAGTTGCCC TCTCCGATTC GGACCGGATC AAGGAAGGGG ACCAGCGGGT GCATTTCAGG GTCAGCTGCG CGTTCTAG
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Protein sequence | MTTIFPPIPD RLRPLLRIAF MCGILATLPI LCDVYAADEP PAARDEARPE EAAEPAATSA PAPAEQPVTF AITTILVERN TLFASDRLQE VMAPFVGDGK TADDVEKARE ALEKFHHDQG YPTVIVNIPE QSVEEGIIRL QVVEQRINTV TVTGNRYFSR EMILGKFPSL QPGGIPHVPT LQAEFTKAGR NPDLKITPAM APSREVGYVD VELKIEEKLP LHGSLELNNR SSHDTSALRL NGAIRYDNLW QREHSVGLQY QTAPEKTREV QILSGSYVLP DPWHDDRRIV FYGVWSDTNT FASLGDMQVL GKGIIVGGRY LIPLAGKGLY NHSATLGIDY KRFDESAGFK TRVSYLPLST AYDASLQDST GYTLFNAGLN FAFRGAVTDQ SEMAVKRSEA KGNYLAAILG LERQQKLPLG MGLRARIDGQ LSSEPLIPNE QFVAGGMDSV RGYKESEALG DNGFHGTVEL RVPDITLGSA MSMTPYVFYD MAAVELKKPL PGENRSQTLQ GTGAGVRGML FKFLEYQVDF AVALSDSDRI KEGDQRVHFR VSCAF
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