Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1341 |
Symbol | |
ID | 3738481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1499016 |
End bp | 1500695 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637778622 |
Product | hypothetical protein |
Protein accession | YP_384301 |
Protein GI | 78222554 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00435658 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTCCCAGC ATGATTCATT GTTTTTTCCC GGTACCAGGA TGCTTCGCGC AGTTTTGCTT GCGATCCTGG CTCTTCCGAT GCTTGCTTCA AGCGCATCGG CACTTTCTTC CCCCAACATC CCCCTGGACA GCCCCGTCTA TTCCTATCTT GAAAAGCTGG CCGGTTTCGG ACTGGTGCAA TCAGACGTGG CGGGGATCAA GCCTTTTTCC CGGGCCGAGG CTGCGCGGCT TCTGCTGGAG GCGGAGTGGG CCCTGGAGGC GGGGGGGGGC TCCGGTGATC CGGCGTTTGC CCGGTCGATC ATGGAGGAGT TGCGCCGGAA GATTCCCCGC GAAGCGGCTC TTTACACGGA ACCCGACAAG GCGTCGGCCG TGGATGTGAA CCCCCTGTCG AGCGCCCGGA TCAGGTATGT GTACCTGGAT GGCAAACCCC GCTCCTACGA GCGGCCGGTC CACGACCCGG GCAACGACGG GGTGTTCGGC ATCGGCTCGG GGCTTCGGCC CGCCAATCCC TATCCTTCTC CCATACAGCA GCACGGCACC GAGGGAACGC CCCTCATGGA GAACAACGAG GGGATCATCT ACCGGGACGG CCACAATGCC GAGCTGCGGT TCAGCGCCGA GGCCCACGTG AAGAGCGTGG CGTCCGCCCT GGTGGAGCCG CAGCTTTCCT ATAGCAGGGG AGGGGACGGG GCTACGGTGA AGCTCGTCAA GGGGTACCTG AAGCTCGGCG GCGGTGGGCT GGAGCTGGAG GTGGGGCGGG ATGCCAACTG GCTGGGGCTC GGGAACCGCG GAACGGTGAC CCTGACCAAC AACGCCGAGA ACTTCGACCT GGTGAAGCTA TCGAGCCCCG AGCCCATTCA ACTGAAGTAT ATCGGCGCCA TCAAGTATAC CTTCATCGGC TCCCGCTTCG ATGCCACCGT GACCAACGGC GTGGAGCGCC GTCCCTGGTT TCTCGGCGCG AAACTGTCGG TGAAGCCCGT TGATATCTTT GAATTGGGGA TCAACCTGGG GAAGGAGTTC GGCGGGCCAG GGGTGAACAA CAGCTTCGGT GATTACGTGC GGGGGATTGT CGGCGGCACG AGCGCGGATA ATACCAACAA CCTGGCCGGG GTGGAGATGC GATTGAGGCT CCCGTTCCTG CGCAATACCG AGATCTACGG CGAGTTCTCC GGGGAGGATT CGGCCTCATT CTGGCCCATC GTGGAGAGCT ACGTGGCCGG CTTCTTCATC CCCCGTCTCA CTGCCGGCGG CAGGGACGAC CTCCGCTTCG AGTTCTTCAA GGGGAACAAC ATCCTCTACA CCAGCGGCAC ATTCCCGGAG GGATACCTCT ATAAGGGGAT GCCTATCGGC CACTCCCAGG GGGGAGCGGT CATCGAGTTC TATCTCCGCT ACAGCCACTG GTTCTCGGCG CGGAACAATC TGGCGCTGGA GTTCTACCGC ACCGACCGGG GCCACGAGGG GAGGGTGAAG GTGGACGCCG CAGGCAACTT TGATCCGAAT GGCGTCATGC AGGCCATCGA GAAAAAGCAT GCTGGCCGGA TTTCCTGGAC CCTCCCGGTC CATGGCGATC TGGACATGAA CCTTCTATAC GGCATCGAGA AGGTCGAAAA TGTTGACCTG CGGTCAGGAA ATGACCGCAC CAACCAGCTC TTCAAGGCGG AGTTGCGGTA TCGGTATTGA
|
Protein sequence | MSQHDSLFFP GTRMLRAVLL AILALPMLAS SASALSSPNI PLDSPVYSYL EKLAGFGLVQ SDVAGIKPFS RAEAARLLLE AEWALEAGGG SGDPAFARSI MEELRRKIPR EAALYTEPDK ASAVDVNPLS SARIRYVYLD GKPRSYERPV HDPGNDGVFG IGSGLRPANP YPSPIQQHGT EGTPLMENNE GIIYRDGHNA ELRFSAEAHV KSVASALVEP QLSYSRGGDG ATVKLVKGYL KLGGGGLELE VGRDANWLGL GNRGTVTLTN NAENFDLVKL SSPEPIQLKY IGAIKYTFIG SRFDATVTNG VERRPWFLGA KLSVKPVDIF ELGINLGKEF GGPGVNNSFG DYVRGIVGGT SADNTNNLAG VEMRLRLPFL RNTEIYGEFS GEDSASFWPI VESYVAGFFI PRLTAGGRDD LRFEFFKGNN ILYTSGTFPE GYLYKGMPIG HSQGGAVIEF YLRYSHWFSA RNNLALEFYR TDRGHEGRVK VDAAGNFDPN GVMQAIEKKH AGRISWTLPV HGDLDMNLLY GIEKVENVDL RSGNDRTNQL FKAELRYRY
|
| |