| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1176 |
|---|
| Symbol | |
|---|
| ID | 3739949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1303683 |
|---|
| End bp | 1304738 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637778452 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_384139 |
|---|
| Protein GI | 78222392 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.216853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.740052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGG AAAAAAAGGG CTTCATCAAG GGGTTGTGGA ACAAGATTGC CGGTGCCGAG
GGGGCAGAGG AAAACCCGAT TCCCGAGCAG AGGACCGAAG TGGCTGAACA TCCTGTTCAG
GCCGAGGAGC CGGAGGAGCG CAAGCCGGGG TTGTTCGAGC GCTTGCGCCA AGGGCTCAGC
AAGACCCGCG ACAGCCTCGT GGGGCGGATC GACCGGCTTG TTCTCGGCAA AAAGGAGATC
GATGCTGACA CTCTGGAGGA ACTCGAAGAG ATTCTCATCA CCGCCGACAT CGGTGTCCAG
ACCACGGTGG AACTTATCCG GATACTGGAA GAGCGGCTCT CTCGCAATGA ATTGAATGAT
GGTGCGGCTC TTCGTCAGAC CCTCAAGGAT GAGATTCTCA AACGGTTGAG CCGGGATGTG
AGACCCCTCG CCGTTGATTC CGCCTCCCCC TTCGTCATCA TGGTCATTGG TGTCAACGGC
GTTGGCAAGA CGACCACCAT TGGCAAACTC GCCGCCCGGT TCTCGCGGGA AGGGAAAAAA
GTAGTACTCG CGGCCGGCGA TACGTTCCGG GCCGCTGCGG CCGAGCAGCT CGAGATCTGG
GGCGAGCGGA CCGGGTGCGA CGTGGTTCGC CATAAGGAAG GAGCCGATCC CTCCGCCGTG
GTCTTTGACG GCATCAAAGC TGCCGTGGCC CGCAAGGCGG ACGTCCTCAT CGTTGATACG
GCAGGGCGGC TCCATACCAA GGTAAACCTC ATGGAAGAGC TCAAGAAGGT CCGTCGCATC
ATGGACCGCG AGATTCCCGG CGCCCCCCAC GAAACGCTCT TGGTCCTCGA TGCCGCCACT
GGCCAGAACG CCCTTTCACA GGCCAAGCTC TTCAAAGAGG CTGCCGAGGT GACCGGCATC
GCCCTTACCA AGCTGGATGG CACGGCCAAG GGAGGGATCG TTGCAGCCAT TTGCAATGAG
TTCCGAATTC CGGTCCGCTA TATCGGTGTC GGGGAAGGTG TCGACGACCT TCGGGACTTC
GATCCGGCCG AGTTCGTGGA TGCACTCTTC CAATAA
|
|---|
| Protein sequence | MAEEKKGFIK GLWNKIAGAE GAEENPIPEQ RTEVAEHPVQ AEEPEERKPG LFERLRQGLS
KTRDSLVGRI DRLVLGKKEI DADTLEELEE ILITADIGVQ TTVELIRILE ERLSRNELND
GAALRQTLKD EILKRLSRDV RPLAVDSASP FVIMVIGVNG VGKTTTIGKL AARFSREGKK
VVLAAGDTFR AAAAEQLEIW GERTGCDVVR HKEGADPSAV VFDGIKAAVA RKADVLIVDT
AGRLHTKVNL MEELKKVRRI MDREIPGAPH ETLLVLDAAT GQNALSQAKL FKEAAEVTGI
ALTKLDGTAK GGIVAAICNE FRIPVRYIGV GEGVDDLRDF DPAEFVDALF Q
|
|---|
| |