| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1141 |
|---|
| Symbol | |
|---|
| ID | 3741348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1260740 |
|---|
| End bp | 1264006 |
|---|
| Gene Length | 3267 bp |
|---|
| Protein Length | 1088 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637778417 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384104 |
|---|
| Protein GI | 78222357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CAACCGACCT TACCCGCTGG AACCGCGCCG GACTAAGCCG CTTCAGGTAC
GTGGACGGCA ACGCCGTCAC TTTTCTGGAA CTGCTGCGGG CTGAGCTGGC CGAGCGCTTC
CCCGCCTGGC AGGAGGTGAC CCAGCTCCCC CTGGCCGAAA CGGAAAGCGA GCGCCAGGAA
CGGATGCTGG AGCAATACCA CGCTCCGCGG CGGGACTGGG CCTGGGAGAT CACCCGGGTC
CTGGCCCGCT CCTCCCACGT CCTGGCCGAG CACCTGGACG CCTACGCCAA CGAGGGGTTC
CTGGGGACCG CCACCCAGTG GGATACCGTG CGGCGCTTGG TGGAGATGAT CGACTACCAC
CCGGCCCCCC CGGCCTCGGC CGCCACCCGG TTCGTCATCG AGGCCAAGGA GGCGGGGACC
CTTGCGGCGG GGTTCGCCGT GAAGCATACC CCCGCCGATG GGAGTCCACC GGTGGTCTAC
GAGACCCTGG AGGAACTGAA GGTCGACCCG CTCCTCAACG CCCTCCGCTC CGCTGAATAT
AACCGGAACC CGGAACGGCT CGGCGGCGAC ACTCTCCTCC TGGAAGGGGA GGTGGAGGAT
CTCAAGACCG GCGAGCCGCT GGTCCTGGAA GACGAGCAGA GCGGCGTCCT TCGGGCCTAC
CTCATCGTCG GCACGCGCAC CGTGGCGGGG AACACCGAGG TGCGGGTGAC GCCGCGCCTC
TCCCACCGGC TCCGCAAAGG GTACACCCTC ATCCACGCCA AGCCGGCCGA GGGGCTTGCC
CCGATCGGTC CGGCCGCCAA AGGGGCGGAG CTGGAGCGGG TCCTACGCCT CACCGAGGAG
CCTGAGGGGC TCCTTACCGG GGCGGTGATC TACATCGACG ACGGTGCCGA AGAGCTCTAC
CGCCGGGTCT ACTCCGTGAC CGGAAAACGG CTTGTCCTCG ACACCGACGT GGGCCCCCTG
CGGCTCGATA CCGCCCGGGT CGGCTACCCG GTCACCATCA CGGTGAGCGC TCAGGAGGAG
CGCCCCGTGG ACAGCCCCGG CTCCGTAATC TACGCCCTCA GGGTGGCCGG AGACTGGTCG
CGCCTCGCCG ACCGGCGGGT TGTCCAGGAG ACCGTGGATG CCACGAAGCA GAAGCATCTT
CCCTTCTACA CGGTGACGGC GGCCCGCTAC CATCCGGCCG ACAGCGACCA TCTCCGCAAG
GGCTACACCA TACTGACCGT CTCGTGGCTG AAGAGCGAAC ATCCCTTCCC CCTGGACAAC
CCCCAGACGC TGCTGGTGCC GCCGGTGGGG GTGGGGCCGT GGCGGACCGA TACCTTCCTG
GAGAAGCAGG ATGGCCATCT CACGGCCGCC ATCGTCACCG CCAAGCCCAA GAAGACCACG
GTCGGCGACC TGGCCGTGGT GGTCATGGGG CACCAGGCCG CCTGGGCCCG GCTTGCCTCC
GTGAGCGTCG ACCTGGCGCG GGAGGAGGCG ACCCTTACGG CGGAAGATGG GTGGGACGAC
CGGGGGGGCG GCGACTTCTT CCTCACGGAG ACGAAGGTCT ACGCCCACTT CAAGGAGGCG
CTCCGGACCG TGGCCTGGCA GGAGAACCGC CAGCCCGTGA CCGGAAACCG CATCCCCCTG
GCGTTGGTGC CGTCTGCCCT GGAGAAGGGG CGCGTCCTCA TGGTGGAGCG GACCGACGAC
GCCACCGCCG CCTTCTTCAC CACGGTGGCC AGGATCGAGG GGACCACCCT GGTTCTCGCC
CGGGATCTGC CGGCGGGATT CACCCGTGGA AACACCCTCA TTGCCGGCAA CGTGGCCCTT
GCGGGCCATG GCGAGAGCAA GGGGGAGAAG GTCCTGGGGA GCGGCGACGC CACCCGGGCC
AACCAGTCCT TCGTCTTCGC CGAGGCGGAG GTCTCCTTCG TGGCCGATCC GACCCAGCCC
GCCGGGGTGC GGGCCGCCAT CGACCTCTCC GTGGCCGGAC GGGTCTGGAA GCAGGTGGGT
AGCTTCGCCG ACTCGGGGCC CACCGACCAC CACTACACGG TGAGGATGAC CGAGGCGGGG
CAGCTCCTCA TCGCCTTCGG CGACGGGGTG CGGGGACGGC GCCTCCCCAG CGGCGTGAAC
AACGTGCGCG TCACCTTCCG CTCCGGAACG GGGCTCAGCG GGAACCTCCC GGCCGGAAGT
CCCTTCAAGC CCTCCCGGCC CCACCGCCTG GTGGAGAAGG TGCGCCAACC CCTCCCCGCC
ACCGGCGGCA ATGACCGGGA AGGAGTGGAG TCGCTGCGGG AGAACGCCCC GGCAACCCTC
CTCACCCTGG AGCGGGCCGT CTCCCTGGAC GACTTCGCCT GGCTGGCCAT GTCCCAGAGC
AGCGTCTGGC AGGCCCGGGC CTTCAGCCGC CCCACGGGGC TCGGCCGCAA CGAGAAGGTG
GAGGTGGTCG CGGTTCCCGC CGGTGGCGGG GCACTGGGAA CCCTCGCCGC GACCCTCACC
GATTTCCTCA CGGCCAATGC CGTGCCCGAG GTGGAGGTGA CGGTCCTCCC CTACCAATCC
CGCACCTTCG CCCTGGAGGT GCTCCTGACC GTGGATACCG CCGCCTACAA TCCCGATGTA
GTGACCGCTG CCGTGAAGAG CGCCCTTCAG GATGCCTTCT CCCTCCGGAA ACGGAAGCTG
GGGCAGGATC TCTTCCTGAG TGAGGTCTAC CAGGTTGTGG AAGGGGTGAC CGGCGTTGAG
CACTCGGTGG CAGTCATCAA TGGCGACCGG AGCGTGCGGA GGGTGGCTGC CGGCGACCGG
GAGGTTCTCA TCCTGGGGCA ACTGGTGGTC GCTGTGGAAG GGGAGGCTGC GACAGGCCCC
TCGCCGGGAG AGGCTATCGA GGCCAGTCCG CCGGCACCCA AGCCACGGCT GGTGGGGCGC
CGGGGAGTGG GAGTCATCCA GGGGGTGGGG GACCGCTACG GCCAGCTCCT GCGGGGGGCG
GGGATCCGGA CCCTGAACGA CCTGCGGGGT ATCGACCCCG CCCACCTCCC GACGGTCGAT
ATCCCGCCAG TCAGATTGTG GGAGTTCAGG ACCAAGGCGG AGATTGTAGT GGGGCTCGCT
GCTGACCGCT CCCGGCTCGC GCCGCTCCTG GAACGCACCA TCCACGACCT GGCCGAGGGT
TCCTCCGCCG ACCTGGTCCG GCTTACCGGC GAGTCAGCGG CGGCGGTGGA CGAGCTGAAG
GCGAAGCTCC GCCTCCTGCA GATCGCCCTG GACGAAGAGG TCTTTGCCGC AGTGACCCTG
CGGGAGCTTC TGAGCGAGCT GGATTAA
|
|---|
| Protein sequence | MSTATDLTRW NRAGLSRFRY VDGNAVTFLE LLRAELAERF PAWQEVTQLP LAETESERQE
RMLEQYHAPR RDWAWEITRV LARSSHVLAE HLDAYANEGF LGTATQWDTV RRLVEMIDYH
PAPPASAATR FVIEAKEAGT LAAGFAVKHT PADGSPPVVY ETLEELKVDP LLNALRSAEY
NRNPERLGGD TLLLEGEVED LKTGEPLVLE DEQSGVLRAY LIVGTRTVAG NTEVRVTPRL
SHRLRKGYTL IHAKPAEGLA PIGPAAKGAE LERVLRLTEE PEGLLTGAVI YIDDGAEELY
RRVYSVTGKR LVLDTDVGPL RLDTARVGYP VTITVSAQEE RPVDSPGSVI YALRVAGDWS
RLADRRVVQE TVDATKQKHL PFYTVTAARY HPADSDHLRK GYTILTVSWL KSEHPFPLDN
PQTLLVPPVG VGPWRTDTFL EKQDGHLTAA IVTAKPKKTT VGDLAVVVMG HQAAWARLAS
VSVDLAREEA TLTAEDGWDD RGGGDFFLTE TKVYAHFKEA LRTVAWQENR QPVTGNRIPL
ALVPSALEKG RVLMVERTDD ATAAFFTTVA RIEGTTLVLA RDLPAGFTRG NTLIAGNVAL
AGHGESKGEK VLGSGDATRA NQSFVFAEAE VSFVADPTQP AGVRAAIDLS VAGRVWKQVG
SFADSGPTDH HYTVRMTEAG QLLIAFGDGV RGRRLPSGVN NVRVTFRSGT GLSGNLPAGS
PFKPSRPHRL VEKVRQPLPA TGGNDREGVE SLRENAPATL LTLERAVSLD DFAWLAMSQS
SVWQARAFSR PTGLGRNEKV EVVAVPAGGG ALGTLAATLT DFLTANAVPE VEVTVLPYQS
RTFALEVLLT VDTAAYNPDV VTAAVKSALQ DAFSLRKRKL GQDLFLSEVY QVVEGVTGVE
HSVAVINGDR SVRRVAAGDR EVLILGQLVV AVEGEAATGP SPGEAIEASP PAPKPRLVGR
RGVGVIQGVG DRYGQLLRGA GIRTLNDLRG IDPAHLPTVD IPPVRLWEFR TKAEIVVGLA
ADRSRLAPLL ERTIHDLAEG SSADLVRLTG ESAAAVDELK AKLRLLQIAL DEEVFAAVTL
RELLSELD
|
|---|
| |