Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1062 |
Symbol | |
ID | 3739509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1182355 |
End bp | 1183794 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637778340 |
Product | formate dehydrogenase, subunit FdhD |
Protein accession | YP_384027 |
Protein GI | 78222280 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0656292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA TCCACATCTA CACCAACGGC CGTTTCGAAG AAAAACAGTC GGGCATCGTC CGGGAATTCC CCCTGGTGCT CCACGTGAAC GGCCGGGAGA TCGCGACGCT GATCTCTTCT CCCCACGATC TCCGGTTTCT CGTTGCAGGG TTCCTTCGCA ACCAGGGGTT CGTGGAGCGG GCCGAGGATT TCCACATGCT GGCCGTCTGC GACGACTTCG GCATCGCCAA CGCGCGGATC AGGGGCGAGC TGCCGGAGCG GCTGAAGCCG GTCCTCACCA GCGGCTGCGG CACGGGGGTC ACCTTTACCC TGGAGACCCC GAAAATCCCT CCTCCCCTGG CCCTGCCTGC TATCACCACC GACGCCGTGT TTCGCCTCAT GGAGGAGCTG GCGCGGCGGG CCGACAACTA CCGGAGCCAC GGCGGCATCC ACTCCGCGGC CGTGGGGGAC GGGGAGGGGA ACCTCCTCCT CTTCGCCGAG GACATCGGCC GCCACAACAC CCTTGACCGG ATCGCCGGCG AGGCCCTCTT CAAGGGGATC GACCTGGCCG GGACAATCCT TGTCACCTCG GGGCGGGTCT CCACCGAAAT GGCTGCCAAG TGCGCCAGGC TCGGAATAGC GCTCATCGCC TCCCGCACCT CCGCCACCGA CATGGCGGTG AAGATGTGCG ACGAGGCGGG GATTCCCCTC ATCGGTTATG TCCGGGGAGG GAAGTTCACG GTGTATGCCC ACCACGAGCG GCTGGCGATG GCGCCACCCG TGGGGGCGAT TCATGAACTG CCCCTACCTG CGTCCGCACA GGGGAGGCGC ATTCCCGGCA TCACCGGCGT CATCCTCGCC GGCGGGCAGT CGCGCCGCAT GGGGAGCAAC AAGGCGCTCC TTCCCTACAA GGGGGGGCGC TTCATCGAGG CCATCCATCG GCAGCTGGCC GAGATCTTCG ACGAGGTGCT CCTCGTCACC AACAACCCGG AGCAGTATGA TTTTCTCCCC TGCCGGAAAG TGGCCGACAT CCACCCGGGG ATGGGGGCAC TGGCCGGCAT CCATGCGGGG CTGCACCACG CCGCCAACCC TGCCGCCTTC ATGGTCGCCT GCGACATGCC GTACCTGAAC AGCGACCTGA TCCGGCATCT GGCCACCCTG GCCGACCCGG GCGGGGTCCT CATTCCCGAA AGCCCGGCGG GGCTGGAACC GCTCCATGCG GTCTACGGCA AAGGGTGCCT TGCCGCCATC GAGACAACGC TCCTGTCGGG CGAACGGCGG ATTGTTTCGT TCTTCGGCCG GACCAACGTC AACCGGGTCA ACGCCGAGCA GGTGGCCCTC TTCGATCCGG ACTACGCCAC CTTCAGCAAC ATCAATACCC CCGTGGACTA TTACCGGCTT CGGGATGGCG AGCGGGACGA ACTCGACGCC GCTCTCGGCG CCGACCGCAT CGCGGGGTGA
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Protein sequence | MKTIHIYTNG RFEEKQSGIV REFPLVLHVN GREIATLISS PHDLRFLVAG FLRNQGFVER AEDFHMLAVC DDFGIANARI RGELPERLKP VLTSGCGTGV TFTLETPKIP PPLALPAITT DAVFRLMEEL ARRADNYRSH GGIHSAAVGD GEGNLLLFAE DIGRHNTLDR IAGEALFKGI DLAGTILVTS GRVSTEMAAK CARLGIALIA SRTSATDMAV KMCDEAGIPL IGYVRGGKFT VYAHHERLAM APPVGAIHEL PLPASAQGRR IPGITGVILA GGQSRRMGSN KALLPYKGGR FIEAIHRQLA EIFDEVLLVT NNPEQYDFLP CRKVADIHPG MGALAGIHAG LHHAANPAAF MVACDMPYLN SDLIRHLATL ADPGGVLIPE SPAGLEPLHA VYGKGCLAAI ETTLLSGERR IVSFFGRTNV NRVNAEQVAL FDPDYATFSN INTPVDYYRL RDGERDELDA ALGADRIAG
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