Gene Gmet_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0925 
Symbol 
ID3740081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1019669 
End bp1020157 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID637778204 
Producthypothetical protein 
Protein accessionYP_383892 
Protein GI78222145 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.540819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACT TTCCTGAGTT CAAGAAAGGG AAGATTCACG ATGTAGCGGT GCGCCCCTTG 
ACGAAATTCC TCGACGAGCG GGGGTGGCTC GCCGAACTGT TCCGCAGCGA TGAAACCGAT
GCTGCCACCA TGCCGGCCAT GGCCTATCTC TCCATGACCC AGCCGGGGGT AGCCCGGGGA
CCCCACGAGC ACGTGGACCA GACCGACTGG TTCTGCTTTA TCGGTCCCTC CAACTTCAAG
GTCTATCTCT GGGATGCCCG GCCCACCTCT GCCACTTTCG GGGTCAAGCA GACCATCTAT
GCCGGCATCG ATGCCCCCCT TGCCATGATT GTCCCTCCCG GCGTGGTCCA CGCCTACAAG
AACGTCGGCG GAGAGAACGG GATCGTTTTC AACGCGCCGA ACCGTCTCTA TGCCGGCGAA
GGGAAGAAAT CGCCGGTGGA CGAGATCCGG CACGAAGAGG TGGAGGGGTC TCCCTTTACG
CTCGATTGA
 
Protein sequence
MQNFPEFKKG KIHDVAVRPL TKFLDERGWL AELFRSDETD AATMPAMAYL SMTQPGVARG 
PHEHVDQTDW FCFIGPSNFK VYLWDARPTS ATFGVKQTIY AGIDAPLAMI VPPGVVHAYK
NVGGENGIVF NAPNRLYAGE GKKSPVDEIR HEEVEGSPFT LD