Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0903 |
Symbol | |
ID | 3738241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 993566 |
End bp | 994720 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637778182 |
Product | carboxynorspermidine decarboxylase |
Protein accession | YP_383870 |
Protein GI | 78222123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0000370822 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGACCGGCA TCGACATTGA AAAAATCCTG AAGCTGGCCC CGTCCCCCGC CTACGTGGTG GACCTGGGGC GGCTGCGCCA CAACCTGGCC ATCCTCGACG ATGTCCAGAA GCGTAGCGGC GCTAAGATCC TCATGGCCTT GAAGGCCTTC GCCATGTGGA GCGTTTTTCC CATCATCCGG GAGACCCTCC AGGGGGTCTG CGCCAGCTCG CCGTGGGAGG CCCGCCTGGG TCGGGAGGAG TTCGGACGGG AGGTCCACAG CTTTGCCGCC GCCTTCAAGG AGAGCGACGT GGTGGAGCTG CTTGCCGTCT CCAACCATCT GGTCTTCAAC TCCTTCAACC AGCTGGAGCG GTTTCGCCCC CTGTGGGAGA AGGAGCGGGG GCGGGTGTCG GTGGGGTTGC GGGTGAACCC CGAGCATTCC GAAGGGCATA CCCCCATCTA CGACCCCTGC GCCCCCAAGT CGCGGCTCGG CATCCCCCGC GCTGCGTTTG AGGGGAAGTC GCTTGCCGGA GTCGAGGGGC TCCACTTCCA CACCCTCTGC GAACAGCTCT TCGAGCCTCT GGAGCGGACC GCGAAGGTCT TCGAGGAGAA GTTCGGGCCG CTGCTCCACG GCATGAAGTG GCTGAACCTC GGTGGCGGGC ACCACATCAC CCGCGCGGGG TACGACATCG ACGCCCTGGT GGAGCTGGTC AAATACTTCA AGGGGAAGTA CGGCGTTGAG GTCTACCTGG AGCCGGGGGA GGCCATCGCC ATCGGCACCG GCGTCCTCGT GGGGGAGGTG CTGGACGTGG TGCGCAACGA GATGGAGATC GCCATCCTCG ATGTCTCCGC CACCTGCCAC ATGCCAGACG TGCTGGAGAT GCCCTACCGC CCCGGCATCA CCGGCGGCTT CGACCCCGGC GAGAAGGCTC ACACCTACCG GCTTGCCGGG CCGTCGTGCC TGGCCGGGGA CGTCATCGGC GACTGGTCCT TTGACAAGCC CCTGAAACCG GGGGACCGGC TCGTGTTCGA GGACATGTCC CACTACACCA TGGTGAAGAC CACCACCTTT AACGGCATCC AGCATCCAGC CATCTGTACC TTTGAGCCGG AAACCGGGGA GCTCAGGGTG GTGCGGCGTT TCGGGTACGA GGATTTCAAG AGCAGATTGT CTTAA
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Protein sequence | MTGIDIEKIL KLAPSPAYVV DLGRLRHNLA ILDDVQKRSG AKILMALKAF AMWSVFPIIR ETLQGVCASS PWEARLGREE FGREVHSFAA AFKESDVVEL LAVSNHLVFN SFNQLERFRP LWEKERGRVS VGLRVNPEHS EGHTPIYDPC APKSRLGIPR AAFEGKSLAG VEGLHFHTLC EQLFEPLERT AKVFEEKFGP LLHGMKWLNL GGGHHITRAG YDIDALVELV KYFKGKYGVE VYLEPGEAIA IGTGVLVGEV LDVVRNEMEI AILDVSATCH MPDVLEMPYR PGITGGFDPG EKAHTYRLAG PSCLAGDVIG DWSFDKPLKP GDRLVFEDMS HYTMVKTTTF NGIQHPAICT FEPETGELRV VRRFGYEDFK SRLS
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