Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0889 |
Symbol | |
ID | 3738848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 979757 |
End bp | 980758 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637778168 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_383856 |
Protein GI | 78222109 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000030411 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000000000323717 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAG TGTTCTCTAT CGGCTGCATG CTCCTCGCCG GAGCGCTTCT CACCGTCGGC ACCGTCCGGG CCGCGTCCGA AGAGCCGACA ATCTACGTCA TCCAGAAGGG GGACACCCTC TGGGGGCTCT CGGACCGCTT CCTCAAGGAT CCCTACTACT GGCCCAACCT CTGGGCCAGG AACCCCGCCA TCGGCAATCC CCACTTTATC TATCCCGGCC AGCGGGTCCG CGTCTACCCG GACCGGATCG AGATCGAACC CCGCACTGTC TCCCCCGGCA CCCCCGCTGT CCAGCGCCCC TCCGAGGAGC CGGTTGCCGA GCGGAGCTTC CTGGTAAGCG GCAGCGAAGG GTTCCTGATG GAAAAGGGGC TCAACCCCGC CGGCCGCATC ATTACCACCA GCCAGAACCG CCAGATCGTG GGTGAGGACG ACATTGTCTA CACCGATATC GGCTCTGTCC ACGGGGCCAA GGAGGGGGAC CGGTTCTCCA TCTACAAGAA GCTTGACGCC GTGAGCCATC CCGTCTCCAA CGTGATTCTC GGCGAGAAGG TGATCCCCCT CGGCACGCTG CAGCTTACCG AGGTGGAGGA GAAGGTTTCC AAGGCCATCA TTACCAAATC CTACCGGGAA ATCGGTCCCG GCTCCATCCT CCTTCCCTAT CGGGACAAGC GCCGGCAGAT TTCCCTTAAG GCTGCCGACC ACGACCTCTC TGGCTACATC GTCGAGACCC AGAGTGGCAA CAATGCAATC GGCGAGGGAG ACATCGCCTT TATCGACTTG GGGAAAAAGC AGGGGATAGA GCCGGGATAC TTCCTCTATA TCCTGCGGGA CGTGGTCCCC GACCAGCAGT ATGCGGACAT CTCCGTTGAG AAGCTCCCCC CCGAGGTGGT CGGTGCCCTC GTGGTGGTGC AGTCGGGGGA GAACACCTCC ACGGGGCTTG TGGTGAAAAG CATCGACACC ATCTACCGGG GGGACCGGGT AGAGGCCAGG ACAAACAGAT AA
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Protein sequence | MKRVFSIGCM LLAGALLTVG TVRAASEEPT IYVIQKGDTL WGLSDRFLKD PYYWPNLWAR NPAIGNPHFI YPGQRVRVYP DRIEIEPRTV SPGTPAVQRP SEEPVAERSF LVSGSEGFLM EKGLNPAGRI ITTSQNRQIV GEDDIVYTDI GSVHGAKEGD RFSIYKKLDA VSHPVSNVIL GEKVIPLGTL QLTEVEEKVS KAIITKSYRE IGPGSILLPY RDKRRQISLK AADHDLSGYI VETQSGNNAI GEGDIAFIDL GKKQGIEPGY FLYILRDVVP DQQYADISVE KLPPEVVGAL VVVQSGENTS TGLVVKSIDT IYRGDRVEAR TNR
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