| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0804 |
|---|
| Symbol | |
|---|
| ID | 3738160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 883667 |
|---|
| End bp | 884671 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637778082 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_383771 |
|---|
| Protein GI | 78222024 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAACT CGGTATTCAA GGCGCTGGTG GTGGAGAAGA CCCCCGAGAA GCAGTTCGTG
CGGGAGATCC GCGAGCGGAG CATCGACGAC CTGCCGGCCG GCGACCTGGT GGTGCGGGTC
CACTACTCCT CCCTCAACTA CAAGGATGCC CTCTCGGCCA CGGGGCACCC CGGGGTGACG
CGGCAGTTCC CTCACACTCC CGGCATCGAC GCGGCGGGTG AGGTGGTCTC CTGCGAAAGC
GGTGCCTTCG CCCCGGGCGA CAAGGTTGTT GTCACCGGCC ACGACCTGGG GATGGAAACC
GACGGCGGCT GGGGGCAATA CATCCGCATC CCGTCGGAGT GGGCGGTGCG GTTGCCCGAG
GGGTTGACGC TGCGCGAAGC CATGGCCCTC GGCACCGCCG GTTTCACGGC GGCCCTGTCG
GTGCTGAAGC TGGAGCGGGC CGGGGTGAGG CCCGATGACG GCGATATCCT CGTGACCGGC
GCCACCGGCG GGGTGGGGAG CATCGCGGTT TCCATCCTCT CCCGGGCGGG CTACCGGGTG
ACGGCAGCCA CCGGCAAGGA GTTCGACGAG GATTTTCTCA AGGGGCTCGG CGCGACAGCC
GTGATCGGCC GTGACGACGT GACGGCCGGC GCGGAGAAGG CACTCCTGGC CGAGCGCTGG
GCCGGCGCGG TCGATGTGGT CGGCGGCCAG ACCCTGGCTG CGGTCCTGAA GAGCACGAAG
TACGGCGGTA CGGTCACCTG CTGCGGTCTC GTGGGGTCGC CGGAACTGCC GATGAACGTC
TACCCGTTCA TCCTGCGGGG GGTGAGCCTT CTGGGGATCG ATTCGGTCCA GTGCCCCCGG
GGGCTTCGCG AGGAGGTCTG GCAGCGGCTT GCGACCGCTT GGAAGCCCTC CCGGCTTGGC
GAGATGGTGA CGGAGTGCAC CCTGGCGGGG CTGGAGGTGA TGACCCAGGC GATTCTCCAT
GGGGGGATCA CGGGGCGTGT CGTGGTTAAC CTGCAGGAGA GCTGA
|
|---|
| Protein sequence | MGNSVFKALV VEKTPEKQFV REIRERSIDD LPAGDLVVRV HYSSLNYKDA LSATGHPGVT
RQFPHTPGID AAGEVVSCES GAFAPGDKVV VTGHDLGMET DGGWGQYIRI PSEWAVRLPE
GLTLREAMAL GTAGFTAALS VLKLERAGVR PDDGDILVTG ATGGVGSIAV SILSRAGYRV
TAATGKEFDE DFLKGLGATA VIGRDDVTAG AEKALLAERW AGAVDVVGGQ TLAAVLKSTK
YGGTVTCCGL VGSPELPMNV YPFILRGVSL LGIDSVQCPR GLREEVWQRL ATAWKPSRLG
EMVTECTLAG LEVMTQAILH GGITGRVVVN LQES
|
|---|
| |