Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0657 |
Symbol | |
ID | 3738306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 717399 |
End bp | 718361 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637777935 |
Product | ABC transporter-related protein |
Protein accession | YP_383624 |
Protein GI | 78221877 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00186139 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGACT TGGCGGTCAC CCTCCGCAAC CTGGAAAAGC GTTTCGGCGA TTTCGTGGCT GTGAACCGGG TGAGCCTCGA CGTGAAACGG GGCGAGATCT TCGGCTTCCT GGGCCCCAAC GGCGCGGGAA AATCCACCAC CATCCGGATG CTCTGCGGCA TTCTCCAGCC CACTGCGGGG AGCGGCACCG TGGCCGGCTT CGACATCGTC CGGCAACCCG AGGAGATCAA GAAGAACATC GGCTACATGA GCCAGAAGTT CTCCCTCTAC GAAGACCTGA CCGTGGAGGA GAACATCGAT TTCTACAGCG GCATCTACCG GATTCCCGAC GCCAAAAAGA AGGAGCGCAA GGAGTGGGTC ATCCGGATGG CGGGGCTGAC GGAGCACCGG ACCTCCAAGA CCGCAATCCT CTCCGGCGGC TGGAAGCAGC GGCTGGCCTT GGGATGCGCC GTTCTCCACG AGCCCCCCAT CATCTTCCTG GACGAACCCA CCTCGGGCGT GGACCCCGTC AGCCGCCGCA ACTTCTGGGA CCTGATCTAC CACCTGGCCG GCGGCGGGGT CACCGTCTTC GTCACCACCC ACTACATGGA TGAGGCCGAA TACTGCGACC GCCTGGCCCT CATCTACCGG GGGGAACTCA TCGCCCTGGG AACCCCGGCG GAGCTGAAGA CCCGCTTCAT GGAGGAGGAG ATCGTGGAGG TGCGCTGCAG TCAGCCCCAG GATGCCATGG AGACCATCGA GGCCATCCCC GGCATGGGAC ACACCGCCCT CTTCGGACGG ACGCTCCATG TTGTTGCCCA GCGGGCCGAC GAGGCGATCC CGGCCATCCA GGAGTCGCTT GCCGCCGGAG GCTTCACCGT GGACGGCATC GAGCGGATCG TCCCCTCCCT GGAGGATGTC TTCGTCTCCC TCATCGAGGC CAGGGACCGG GAGACCGCGC CCCAACGGGA GTTCAGACGA TGA
|
Protein sequence | MSDLAVTLRN LEKRFGDFVA VNRVSLDVKR GEIFGFLGPN GAGKSTTIRM LCGILQPTAG SGTVAGFDIV RQPEEIKKNI GYMSQKFSLY EDLTVEENID FYSGIYRIPD AKKKERKEWV IRMAGLTEHR TSKTAILSGG WKQRLALGCA VLHEPPIIFL DEPTSGVDPV SRRNFWDLIY HLAGGGVTVF VTTHYMDEAE YCDRLALIYR GELIALGTPA ELKTRFMEEE IVEVRCSQPQ DAMETIEAIP GMGHTALFGR TLHVVAQRAD EAIPAIQESL AAGGFTVDGI ERIVPSLEDV FVSLIEARDR ETAPQREFRR
|
| |