| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0643 |
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| Symbol | rpsE |
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| ID | 3738350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 707832 |
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| End bp | 708320 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637777921 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_383610 |
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| Protein GI | 78221863 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00000275279 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000000114757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGCAGAAGA TCAATCCAAA TGAATTGAAC CTTACTGACA AAGTTGTCCA TATCAGTCGG
GTCGCGAAAG TTGTTAAAGG TGGTAGGCGG TTCAGCTTTT CGGCGCTTGT TGTTGTCGGC
GACGGAAGCG GTTTTGTTGG CTATGGTTTG GGCAAGGCTA ATGAAGTCCC TGAAGCCATC
CGCAAGGGCG TGGAACAGGC AAAGAAAAAT CTTATCAAGG TTCCGATTGT CGAAGGCCAG
ACAATCCCCT ATGAAGTTTT AGGACACTTT GGTGCCGGTC GCGTGCTTAT CAAACCGGCA
TCCGCAGGTA CTGGTGTTAT CGCCGGTGGC GCAGCCCGTG CTGTTTTCGA ATCAGCGGGA
CTTCACAATG TTCTCTCCAA GTGCCTTGGC TCAAACAATC CGCACAACGT TGTGAAGGCT
GCTTTTGACG GGCTGAAACA ACTTCGGAGC CCTGACGAGA TTATGGCGCG GCGCGGAATG
GCTGAATAG
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| Protein sequence | MQKINPNELN LTDKVVHISR VAKVVKGGRR FSFSALVVVG DGSGFVGYGL GKANEVPEAI
RKGVEQAKKN LIKVPIVEGQ TIPYEVLGHF GAGRVLIKPA SAGTGVIAGG AARAVFESAG
LHNVLSKCLG SNNPHNVVKA AFDGLKQLRS PDEIMARRGM AE
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