| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0602 |
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| Symbol | |
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| ID | 3738949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 672920 |
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| End bp | 674008 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637777876 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_383570 |
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| Protein GI | 78221823 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000206723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0345378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAGG TGTTCAAGGT GGCGGTTCTT CCCGGTGACG GCATCGGTCC CGAGGTTATG
GCCGAGGCGC TCCGGGTGCT GGACGCCATA GAGAAGAAGT ACGACGTGAA ATTCGAGCGG
ACCCACGCCA ATGTCGGGGG CGCCGGTATT GACCTTGAAG GGAAGGCCCT CCCCGAAACT
ACCATTACTA TCTGCAAGAC GTCCGATGCC ATCCTCTTCG GCTCCGTGGG CGGCCCCAAG
TGGGAGACGC TTCCCCCGGA TGAGCAGCCC GAGCGGGGCG CGCTCCTTCC CCTCAGAAAG
ATCTTCGGTC TCTACGCCAA CCTGCGGCCG GCCATCATTT TCCCGTCCCT GACGGGCGCT
TCTTCCCTCA AGGAGGAGGT CATCGCCGGC GGTTTCAACG TGCTGGTTAT CCGCGAGCTG
ACCGGCGGCA TCTACTTTGC CCAGCCCAAG GGGATCGAAG GCGAGGGGCG CGACCGGGTC
GGCTTCGACA CCATGCGCTA CAGTGTCCCC GAGATCGAAC GGATCACCCA CGTTGCCTTC
CAGGCGGCTC GCAAGCGGGG CAAAAAGGTC TGCTCCATCG ACAAGGCCAA CGTTCTCTCC
TCGTCGGTCC TCTGGCGCGA GGTGGTCACC GGCATTGCCA AGGAATACCC GGACGTGGAG
CTCTCCCACA TGTACGTGGA CAATGCTGCC ATGCAGCTGG TCCGCTGGCC CAAGCAGTTC
GATGTCATCC TCTGCGAGAA CATGTTCGGC GATATCCTCT CCGATGAGGC AGCCATGCTG
ACCGGCTCCC TGGGGATGCT CCCCTCCGCG TCGCTTGCCG AGGGGACCTT CGGCATGTAC
GAGCCCTCCG GCGGCAGCGC CCCGGACATT GCGGGGCAAG GGATTGCGAA CCCCATCGCC
CAGATCCTCT CCATGGGGAT GATGCTCCGC TTCTCCTTCG GCATGGTGGA CGCGGCCGAT
GCCATTGACA ACGCCGTGGC CAAGGTGCTC GACCAGGGAT GTCGGACCCG TGACATCTTT
CAGGAGAAGC CGGGCGAAAA GCTCGTCAAC ACCAAAGAGA TGGGTGACGC GATCATCGTG
GCCCTGTAA
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| Protein sequence | MSQVFKVAVL PGDGIGPEVM AEALRVLDAI EKKYDVKFER THANVGGAGI DLEGKALPET
TITICKTSDA ILFGSVGGPK WETLPPDEQP ERGALLPLRK IFGLYANLRP AIIFPSLTGA
SSLKEEVIAG GFNVLVIREL TGGIYFAQPK GIEGEGRDRV GFDTMRYSVP EIERITHVAF
QAARKRGKKV CSIDKANVLS SSVLWREVVT GIAKEYPDVE LSHMYVDNAA MQLVRWPKQF
DVILCENMFG DILSDEAAML TGSLGMLPSA SLAEGTFGMY EPSGGSAPDI AGQGIANPIA
QILSMGMMLR FSFGMVDAAD AIDNAVAKVL DQGCRTRDIF QEKPGEKLVN TKEMGDAIIV
AL
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