| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0575 |
|---|
| Symbol | |
|---|
| ID | 3738232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 622606 |
|---|
| End bp | 625989 |
|---|
| Gene Length | 3384 bp |
|---|
| Protein Length | 1127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637777849 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_383543 |
|---|
| Protein GI | 78221796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGA TGATAGCGGC AACAGCCGCT GTGCTTTCTG TGGTGTTTCT GGCGGTAACG
GGTGCCAGTG CCTCCATTCA GTGCTATGAC TGCCATGGCA CAACTGCAAC TGCGGACATC
CGCCCCAACG ATACCGCATA CCGCAATATC ACTACCGGTG CCTTCAAGGG GAGCCACCAG
ACCCACATGG CACCGGGCGC GACGGTCACA AGCTGCACCC CCTGCCACGG GGGGAGGGTC
ACGAGCTACA CCACGAGCCA CCGCGAGGGC TTCATCAACC TCACGAGCAA CGTCAACGGT
TCACCGGCCA CAGGGGTTTA CAGCCGCGGC ACCCTCTTTG CGCAGAGCTC GGATCCAACC
CTCGGGACCT GCTCCAATGT CAACTGCCAC TTCGAGACGG TTACCCCCAC TTGGGCCTTA
ACCCCGCTCT CAGCCCCGGC CGACTGCAAC AAATGCCACG GCGCAGCCCC TGCCGACGGG
AGCCATCCCG CCACATCGGG CAGTGGCAAG AAGCATGGCG ACTACTACGG CCTCACCACC
AGTTCCTGCG CCAGGTGCCA CCCCGACCAT ACCCTTGAGG CGCGGCCCTT CGACCATGCC
ACCAGCGCCG GCAACCGCGG ACTCATCGTG CAATTCACGA CGGCGCCCAA CAACGGTTTC
GGCCGTTATA CCGGCAACGT GAGGTACCCC AACTATCTGC CGAGCCAGAA CCCGTCCCGC
AACGGCACCT GCAGAAACCT TTACTGCCAC AGCCCCGGCA ACAAGGCGAG CAGCTTCGAT
CTTCCCAACA ACAGCGCCAC CTGGGGCGGT TCTCTCAGCT GCAAGGGGTG CCACAAAGCG
GATATCGCTT CAGGCGATGC CATTACGAGC GGCAGCCACC AGGGCCACGT CAACGGCCAA
GGCATCGGCT ATACCCAGAT CAAGTGCGTC AAGTGCCATG GGGCCACCGT CAACTCCAGC
ATGACGATCG TCAATACCGG CAACCATGTG AACGGACAGG TAACGATCGC CTTCGACAAC
ACCTCTTCTG CCGCCGGCGG CACCTATAAC GGCCAGCCTG CCAAGCCGGC AACCCCGTCC
ACCAAGGCCC CCGGCTCCAC CTACGGCAGC TGCCAGAACG TCTACTGCCA CTCCACCGGC
CAGACCGATG GCGGCACCTG GCCTCCCCTC TACACCACTC CCACCTGGGG GAGCGGCGCC
ACCGGCAAAT GCGGCACCTG CCACGGCACC ACCGGCAGCG ACACCCACGG CGGCTTTCCC
GGCACCATGA TCCAGCGGAG GATCTCCTCC GGCAGTCACA AGAAGCACCT GAGCCGGGTC
TACGGCCTGA CCGATCTGGA CATGAGGTGC GCCATCTGCC ACGCCTACGA CAAGACCGCC
TTCACCAGCA ACCTCACCAC CTGCGGCCCG GTCTGCCATG TCGCCAGCAT GCCGCAGAAG
CACGCCAACT ACGAGATCAA CGTCAACATC GCCAACTACT TCGGCGCCAC CGCCACCTAC
AACGGCTCCA CCACGCCGGG GGCGGGCTAC AGCAGCTGCT CCAGCGTCTA CTGCCACTCC
GACGGCAAGG CAACCCCCAC GACCTATGCC ACCCCCACCT GGGGCAACGC CGCCAGCGGC
GCCTGCGGCA CCTGCCACGG CGTCACCGCC GCTGCGCCGC CGGCCTCAAC CCCCCACACG
AAACACGTGG GGAGCGCCTA TCCCTACCGC TTTGCCTGCG CCGAATGCCA CAGCGGCAAA
GTTCAGGTGA CCGCCAACGC CACCATCGCC CCGGCCTTCG CCAACTCAAC CAGCCACGTG
AACAAGACGC GGGACGTGAA GTTCGACCCC ACCAACCCCT TCGGGACCTA CTCCTCGGCC
GCCACCACGT GCCGCAACCT CTACTGCCAT TCCACCGGCA ACACCAGTGT TGCTGCGGCC
AACCTCCCCG GAGTCTACGG CGGGAGCGTC TACGCGCGGC AGGGGTGGAC AGGAAGCGTC
ACCTGCACCT CGTGCCACGG CCGCTCCACC ACCAACGGCA TGCCCGACTA CACCAACGCC
GGCGCGCCGG GATCGGCCAC GGCCAACAGC CATCCGAAGC ATGTCACGAG CAGCACCATC
GCCTGTAACG AGTGCCACGA GAAGACCACC AAGAACAACA CGAGCATCCG CCCGACTACG
CCGAGCTACC ACGTTGCGGG CACTCCCAGC GTCTTCTTCA ACCTCTCCGG CGCCAACAAG
AACGGGACGT ACAACGGCAC CGTGGGGCAG AAGACCTGCA CCAACATCTA CTGTCACAGC
AACGGGTCCG GGACCTACCA GTCTCCCGCC CCGCAGTGGG GTAACAGTTA CAACTGCGGC
TCCTGCCATC CCATCGCCAG TCTCAGTGCC ACCCACGCCA AGCATATCGA TGTAACGGTG
ACGCCGACCT TCTACACCTT TACGGCCAAC CGCTCATCGG GCGACGATAC GACCGGCAAG
TACTACTTCG GCTGCTCCAA CTGCCATCCC CTGGACGCCG TCAATCACGC CAACGGCAGC
ATCACCCTGG ATTTGCGTCC TGCCGTCGGC GGTGTGAGCA CGCTCCGTTC GAAAAACAGT
GCCGCCATAA CCGCTTTCGG CACCGCCGGA ACAGCCAACA GCGGCACGAT CGGCACCAGC
AAATCCTCGG TCAAGTGCCT GAATATCTAC TGCCACAGTA ACGGCTATGC AGCGAACCCT
GTCTACGCCA CAACACCGGA CTGGTACGGC GGGAGCTTTA CCGACCGGTG CGCCAGCTGC
CACGGCAACT CCCCCAACAG CACCATCAAC GGCTCGCCGG CCCACTACAA CACCAATTTT
GTCGGCACGG GGGTCAGCAA CGGCCATGTG GTGGGGATCC ATTCCGACGA CATCTTTACC
GGAACAAGCG GTCTCGCCAC CGCCGGAACC GGCGCCACCA ACAGCCACGG CAACAGCGCA
TACTCGACCA CCATCAACTG CAACGTCTGC CACAACCTGA CGGTCACCAG CGCCCGGAAC
GATTCGAACG TAGTCTGCAA GACCTGCCAC TACAGCGGCA ATACCGTCGG CGCCCTTGTC
GGCAACAGCG CCGCCATCGC CAACAAGGCT CTCCATGTGA GCGGGCAGGT GAATGTCTCC
TTCGCGGCAG TCGCCGTAAA ATCGAAGGCC GAGGTGAGGA CCGCCAGCGC GGTCGTGCAG
CCCTACAAGA CCACCTGGAA CCGGGTCGGA ACCTACAAGA GCTCCGGCTC GTACGATCAG
GCCGCCAATG CGCTCAACAC GGCCTCCATG TGGAACGGGG CCACCAAGAC CTGTTCGAAC
ATCGCCTGTC ACAACGGGCA GCCTGTCACC TGGACTTCCA CCGGTGGCGC CACCGGTTGC
CAGAGTTGCC ACCCGGCTTT GTAG
|
|---|
| Protein sequence | MKSMIAATAA VLSVVFLAVT GASASIQCYD CHGTTATADI RPNDTAYRNI TTGAFKGSHQ
THMAPGATVT SCTPCHGGRV TSYTTSHREG FINLTSNVNG SPATGVYSRG TLFAQSSDPT
LGTCSNVNCH FETVTPTWAL TPLSAPADCN KCHGAAPADG SHPATSGSGK KHGDYYGLTT
SSCARCHPDH TLEARPFDHA TSAGNRGLIV QFTTAPNNGF GRYTGNVRYP NYLPSQNPSR
NGTCRNLYCH SPGNKASSFD LPNNSATWGG SLSCKGCHKA DIASGDAITS GSHQGHVNGQ
GIGYTQIKCV KCHGATVNSS MTIVNTGNHV NGQVTIAFDN TSSAAGGTYN GQPAKPATPS
TKAPGSTYGS CQNVYCHSTG QTDGGTWPPL YTTPTWGSGA TGKCGTCHGT TGSDTHGGFP
GTMIQRRISS GSHKKHLSRV YGLTDLDMRC AICHAYDKTA FTSNLTTCGP VCHVASMPQK
HANYEINVNI ANYFGATATY NGSTTPGAGY SSCSSVYCHS DGKATPTTYA TPTWGNAASG
ACGTCHGVTA AAPPASTPHT KHVGSAYPYR FACAECHSGK VQVTANATIA PAFANSTSHV
NKTRDVKFDP TNPFGTYSSA ATTCRNLYCH STGNTSVAAA NLPGVYGGSV YARQGWTGSV
TCTSCHGRST TNGMPDYTNA GAPGSATANS HPKHVTSSTI ACNECHEKTT KNNTSIRPTT
PSYHVAGTPS VFFNLSGANK NGTYNGTVGQ KTCTNIYCHS NGSGTYQSPA PQWGNSYNCG
SCHPIASLSA THAKHIDVTV TPTFYTFTAN RSSGDDTTGK YYFGCSNCHP LDAVNHANGS
ITLDLRPAVG GVSTLRSKNS AAITAFGTAG TANSGTIGTS KSSVKCLNIY CHSNGYAANP
VYATTPDWYG GSFTDRCASC HGNSPNSTIN GSPAHYNTNF VGTGVSNGHV VGIHSDDIFT
GTSGLATAGT GATNSHGNSA YSTTINCNVC HNLTVTSARN DSNVVCKTCH YSGNTVGALV
GNSAAIANKA LHVSGQVNVS FAAVAVKSKA EVRTASAVVQ PYKTTWNRVG TYKSSGSYDQ
AANALNTASM WNGATKTCSN IACHNGQPVT WTSTGGATGC QSCHPAL
|
|---|
| |