| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0563 |
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| Symbol | |
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| ID | 3738220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 606130 |
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| End bp | 608031 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637777837 |
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| Product | permease |
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| Protein accession | YP_383531 |
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| Protein GI | 78221784 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTAA ACATCTTCGG ATCAAAACCA AAGGAGGCGT GCGAGGTCCA CGGACACCAT
TCGGGGTCCG GGAACCGGAT GCTCGTCGCC ATGATTCTCA TCTCCCTCTC CCTGGTGGTG
TGGCACGTCG GGTCCACCGG CACGGGGGGG CACCCGGCAG CCTCCGGGGC CGCGCCGGTC
CCGTTTCCCG TGCGGCTCGG CAGCGAGCTC CGGGATCTGT TCTTCAGCGA TCACGGCGTC
CTGGCCGAAC TCCGGGACGT GTTCCCCTAC TTCCTCGTCG GCATCCTCAT CGCCGGATAT
CTCCGCACCT TCAAGATCGC CGTCAAGCTC CAGGCCAAGC TCCGGAAGTA CGGCGTGCTC
AGCGTCTTTA TCGCCTCCTT CGTGGGGATC ATCACCCCCC TGTGCGCCTG CGGCACCGTG
ACCACCGCCA TCAGCCTCCT GGTGGCGGGG ATTCCCCTGG CGCCGGTCAT GGCCCTCATG
GTGACCTCGC CGCTGCTGAG CCCCTCCACC TATCTCCTCA CCCTGAACGA TCTCGGCCCC
GAATGGACCG CCATCAGGAC CATCTCCGCT CTCTCCATGG GGATCTTCGC CGGTCTCGTC
ACCCACTTCC TCAGCAATCG GCCCGGGTTC CGGAAAAACG AAATCTTCAT CGAGGGGGCC
CTGGTGAGGG GGGACTTCCA CGACGAGGAC TATCCCGACG AGCGGCTCCG GTGCAACTGC
CGGCGCCAGT TCGGCAACCG GATCGCCGTC AGGACCGGGA ACAAGTTTCT CATCTTCCTG
GCCAAGTCCG TGGAAATGCT CTGGGTGGTG GGGAAGTACG TCATCGTCGG CGTCGTCATC
GGGGCCGTGG TGGAGCGGTA CATGCCCCAG GAGTGGGTCT ACCGCTTCTT CGGCCAGGGG
GACCCCCTCG GCATCCTCTG GGTGACCCTG GCATCGGTGC CCATGTTCCT GCACCAGATC
AGCGCCTCCA GCATCATCCA CCACATCAAG GGCTCCCTTG GCGGAACCCT CGACGCCGGC
GCGGCCCTGG CGTTCATGAT CGGTGGGCCG GTCACCGCCG TGCCCACCAT GGTGCTCTTC
TGGAGCTTCT TCCGGAAGCG GGTCTTTTTC CTCTACATGT TCGTCTGTCT CTCGGGAACG
CTCCTCATTG CCTACGCGTT CCAGGCTCTC GTCTTCACGC CCGGCGTCGA TATCGGGAAT
CCCCTGCTGA AGGGGGTCGC TTCGCTGTCG GGGGGGGAGG CCTCCGTCAT TGCGAAGCAG
GATGCCAACG TGCGGATGGT TCTGGACCCG GGAGGCAAGG GGGTTGTCGC CACCTACAGC
AACGCGGTTG ACGGCCGGGG ACCCGTGGTG TTCGACGGGG TACGGGGGCG TTTCACCGCT
TCCCTGGCCA ACCGGTATGA CAATCGGGCC TACATCGGCA ACATCGCCGA CTGGCTCGGG
GAGAACTCCC TCACCGCCGC CTCCGCCAAG ATTCTCGTCT ACAGCCTCGG CAATGGTGCC
GGCGATGCCG CATCGCTCCT GGGAGAGAAG ACCCTGGCCG AGCTGGGTGC CAGGGGATTT
ACCGTCAAGG CGGTCGAAAG GCATGATGTG CCGCGAATTA CCGAGGGGGT GCTGGCAGGC
TGCGGCCAGG TGTGGCTCTT CTTCGGCGAC GACCACGCCG ACGGGTTGAA CGATGCCGAA
GTGAAGCTCC TTGCGGACTT TAATGCCAAC GGGGGGGGCG CCCTGATTGT GCCCGGCGTG
GCGAACACCC GCGGGGCCAA CCTCCTTGTG TCCCGCTATG GCGTGACCTT CTCCGGCGTT
GCCGACAACG GTCCGGAGGT GCGGGTTTCC GCCGCGTCAA CGGTTCTCAA CCGGACCGCC
GAGTGGCTCG GCTCCGTTCT GAAACTGGTA AAAAAGGCCT GA
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| Protein sequence | MAVNIFGSKP KEACEVHGHH SGSGNRMLVA MILISLSLVV WHVGSTGTGG HPAASGAAPV
PFPVRLGSEL RDLFFSDHGV LAELRDVFPY FLVGILIAGY LRTFKIAVKL QAKLRKYGVL
SVFIASFVGI ITPLCACGTV TTAISLLVAG IPLAPVMALM VTSPLLSPST YLLTLNDLGP
EWTAIRTISA LSMGIFAGLV THFLSNRPGF RKNEIFIEGA LVRGDFHDED YPDERLRCNC
RRQFGNRIAV RTGNKFLIFL AKSVEMLWVV GKYVIVGVVI GAVVERYMPQ EWVYRFFGQG
DPLGILWVTL ASVPMFLHQI SASSIIHHIK GSLGGTLDAG AALAFMIGGP VTAVPTMVLF
WSFFRKRVFF LYMFVCLSGT LLIAYAFQAL VFTPGVDIGN PLLKGVASLS GGEASVIAKQ
DANVRMVLDP GGKGVVATYS NAVDGRGPVV FDGVRGRFTA SLANRYDNRA YIGNIADWLG
ENSLTAASAK ILVYSLGNGA GDAASLLGEK TLAELGARGF TVKAVERHDV PRITEGVLAG
CGQVWLFFGD DHADGLNDAE VKLLADFNAN GGGALIVPGV ANTRGANLLV SRYGVTFSGV
ADNGPEVRVS AASTVLNRTA EWLGSVLKLV KKA
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