Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0258 |
Symbol | |
ID | 3738630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 289629 |
End bp | 290624 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637777533 |
Product | dihydrouridine synthase, DuS |
Protein accession | YP_383228 |
Protein GI | 78221481 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.704286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACA CAACTCCATC ACCCGTTACA ACTCCACGCA CTCCCCTCCC CTGGCCGACC GGCCACACCC CCCTGATGCT GGCCCCCATG CAGGGGCTGA CGAACCGCGC CCTGCGTGCC CTGTTCATCA ACTGGGTACG GCCCGATGTG GTCTTTACCG AGTTCATGCG GGTCAATCCC GGCGGAGCGC GGCAGCCGAT CAGGGCGGGG GATCTGCGGG AGGTGGCCGC CGTGGAGGGG GGCGTCCCCC TGGTGGTACA GCTCATCGGT CACGACCATA AAGCCCTGGT GGCCGCTGCC CGGACGGCTC AGGAGGCCGG GGCAGTCCAC ATCAACCTTA ATCTCGGCTG TCCCTACGGA CGGATGACTT CCGGCCTCAC CGGCGGAGGG ATGCTGCACC GCCCCGAGGC CCTGGAAGAG CTCATCCCAG CCCTGCGGAG GGCCATTGCG GGGACATTTT CCGTCAAGGT CAGGGCAGGC TACGACGACT CCGGGCAGAT AATGACCCTC CTCCCCCTGT TCGAGGAGGC GGGGGTCGAC TTCCTGGTGC TCCATCCCCG GACGGTTGTG CAGGAATACA CCGGCCACGC CGACCATGCC GTTACCGCCG AGGTGGTGCG GCAGACCCGG CTCCCGGTCA TCGCCAACGG CGACGTCCGG AGCGCCGCCG ACGGTCTGCG GGTCCTGCGG AAAACGGGGG CGACGGGACT CATGCTGGGG AGGGGAGCCA TCGCCGACCC CCTGCTGTTC CAGCGGCTCA GGGGCAAGGC GCCGGCCGAA CCGACCGGTG AGGAACGGGT GGCAATGCTC AAGCGTTATC TGGGGGAGTT GCTGGAGGGA TACGGCGAAA TCTTCTGCGG CGACACGCAG ATTCTGGGGA AGATCAAGGG AGTCATGGCC ACCATGGACG ATCCCTTCCT GGCAAAGGGG CTCAAACAGC TCAAGAAAGC GCGGACTGTC GCGGCCTTCG CCTCCACCCT GAGAGACATC CAATGA
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Protein sequence | MHDTTPSPVT TPRTPLPWPT GHTPLMLAPM QGLTNRALRA LFINWVRPDV VFTEFMRVNP GGARQPIRAG DLREVAAVEG GVPLVVQLIG HDHKALVAAA RTAQEAGAVH INLNLGCPYG RMTSGLTGGG MLHRPEALEE LIPALRRAIA GTFSVKVRAG YDDSGQIMTL LPLFEEAGVD FLVLHPRTVV QEYTGHADHA VTAEVVRQTR LPVIANGDVR SAADGLRVLR KTGATGLMLG RGAIADPLLF QRLRGKAPAE PTGEERVAML KRYLGELLEG YGEIFCGDTQ ILGKIKGVMA TMDDPFLAKG LKQLKKARTV AAFASTLRDI Q
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