Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0256 |
Symbol | |
ID | 3738628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 286197 |
End bp | 287843 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637777531 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_383226 |
Protein GI | 78221479 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.90557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.230564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC CCCTCATTCC CCGTACCCCC TCGGCCTACG ACTATCCGCT GCTGATCAAG AACCTCCTCT TCTGCCCCGT GGTGGACAAC CCGGACCAGG AGATCGTCTA CCGCGATCTC TACCGCGGCA CCTACCGCGG CCTTCGGGAG CGGGTCCGGC GCCTGGCCAG CGTCCTGACC GGGCTGGGGG TGAAGCCCGG CGACACCGTG GCGGTCATGG ACTGGGACAG CCACCGCTAC CTGGAACTCT TCTTTGCCGT GCCGATGATC GGTGCGGTGC TCCATACCAT CAACGTCCGA CTCTCGCCGG AGCAGATCCT CTACACCATC GACCATGCGG AGGACGACCT CCTCCTGGTG AACAGTGAAT TCCTCCCGAT CCTGGAGCAG ATCCGGGGAC GGCTCGACGC GGTGCAAGGG TACGTGCTCC TTACCGACGA GGCGAAGGCG CCCGAAACCG CCATCCCCTT CCTCGGGGAG TACGAGGCGC TCCTGGCGGC AGCAGCGCCG GAATTCGAGT TCCCCGACTT CGACGAGAAC ACCCGGGCCA CCACCTTCTA CACCACCGGC ACCACCGGCA TGCCCAAGGG GGTCTACTTC AGCCACCGCC AGCTGGTCCT CCACTCCTTC GGCGTCATGA CGGCCTTGAG CACGGCGGTG GGGCACGGCA CGTTCCGCCG CACCGACGTC TACATGCCCA TAACCCCCAT GTTCCACGTT CACGCCTGGG GGATGCCTTA CGTGGCCTCC ATGCTGGGGG TGAAACAGGT CTATCCGGGG CGCTACGTGC CGGACCAGCT CCTGGAGCTC ATCGAGCGGG AGAAGGTGAC CTTTTCCCAC TGCGTCCCCA CCATCCTCCA CATGCTCCTG AAGCATCCCC ATGCCGAGCG TATCGATCTC TCGGGGTGGA AGGTGATCAT CGGCGGCGCG GCCATGTCCC GGACTCTCTG CCTGGAGGCG CTGCGGCGCG GCATCGATGT CTTCACCGGC TACGGCATGT CCGAGACCTG CCCCATCCTC TCCCTTTCCC ATCTCACGCC GGAGATGCTG GAACTTTCCC CGGAGGAGCA GGCGACGATC CGCTGCAAGA CCGGCCAGGC CCTGCCGCTG GTGGATCTGC GGGTGGCGGG GGGCGAGCTG CGGGAGCTTC CCCGGGACGG GGTGAGCAGC GGCGAGATCG TGGTTCGGGC CCCCTGGCTC ACCCAGGGGT ACCTGAAGGA CCACAAGGCC TCGGAGCGGC TCTGGGACGG AGGATATCTC CACACCGGCG ACGTGGCGGT CCGGGATGGG TTGGGATACG TGCGGATCAC CGACCGGACC AAGGATGTCA TCAAGGTGGC GGGGGAGTGG GTCTCGTCCC TGGAACTGGA GGACATCTTC GCCCACCATC CGGCCGTGGC CGAGGTGGCG GTCATCGGCC AGCCCGACGA GAAATGGGGG GAGCGCCCCC TGGCCCTGGT GGTCGCGAAG CCCGGCGAAG CCGGCCGGGT GACGGAGAAG GAACTGGTCC ACCATGTGCG GGAGTACGCC GACAAAGGGG TCGTCAGCAA GCAGGTGGTC CTTGCCCGAG TCCGCCTCGT GGAGGCCATC GACAAGACCA GCGTGGGCAA GACCAACAAG GTCGCCCTGC GGGAAAAGTA CCTGTAG
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Protein sequence | MSDPLIPRTP SAYDYPLLIK NLLFCPVVDN PDQEIVYRDL YRGTYRGLRE RVRRLASVLT GLGVKPGDTV AVMDWDSHRY LELFFAVPMI GAVLHTINVR LSPEQILYTI DHAEDDLLLV NSEFLPILEQ IRGRLDAVQG YVLLTDEAKA PETAIPFLGE YEALLAAAAP EFEFPDFDEN TRATTFYTTG TTGMPKGVYF SHRQLVLHSF GVMTALSTAV GHGTFRRTDV YMPITPMFHV HAWGMPYVAS MLGVKQVYPG RYVPDQLLEL IEREKVTFSH CVPTILHMLL KHPHAERIDL SGWKVIIGGA AMSRTLCLEA LRRGIDVFTG YGMSETCPIL SLSHLTPEML ELSPEEQATI RCKTGQALPL VDLRVAGGEL RELPRDGVSS GEIVVRAPWL TQGYLKDHKA SERLWDGGYL HTGDVAVRDG LGYVRITDRT KDVIKVAGEW VSSLELEDIF AHHPAVAEVA VIGQPDEKWG ERPLALVVAK PGEAGRVTEK ELVHHVREYA DKGVVSKQVV LARVRLVEAI DKTSVGKTNK VALREKYL
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