Gene Gmet_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0248 
Symbol 
ID3739711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp278908 
End bp279732 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID637777523 
Producthypothetical protein 
Protein accessionYP_383218 
Protein GI78221471 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000174158 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00180581 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGTGG CGTTCGCACT TCTCCCCGCT CCTGCAACGG CCCACACGGA GGAGGATCTC 
CACAAGCACG GCCCCTTTGG CACGGATGCC GGAGCGGGTG ACGCGGCAAA GTTCGGCCTC
ACCGAACGAC TGGGAGAGAA AATCCCCCTC GACCTCACGT TTCGGGACGA GACCGGCGCG
CCGGTCCGTC TGGCGGCTCT GGTGACCGTC CCCACCATCA TCCTTCCCGT CTACTACAGT
TGCACCAACG TCTGCAATTT CCTCCAGGGG GGGCTCGCCA GCGTCCTGAA GGATGTCAGG
CAGAGGCCGG GGGAGGAGTA CCGGGTAATC TCGGTCAGTT TCGATGAAAC CGAGACGCCG
GAGCTGGCCA CCAAGTACAA GCGGACGTAT CTGGCATCCA TGAACGCCCC CTTCCCGGAG
AACGGGTGGC GGTTCCTGAC CGGGGATGCG AAGAACATCC GTCGGCTGAC CGATGCGGCC
GGCTTCCGGT TCGAGCGCCG GGGGAGGGAT TTCATCCACC CGGTGGCGAG TATTATTGTC
GCCCGGGACG GGACTATCGT CCGGTACCTC TACGGGACGA CTTTTCTCCC CAAGGACCTC
TCCCTGGCGC TGCTGGAAGC CCGGAGCGGG AAGGTGGGGG CGACGATCCG CCAGGTGGTG
GGGTACTGCT TCACCTTCGA CCCCCAGGCG AAGACCTACG TCTTCAACCT GCTGCGGGTG
AGCGCCACCA TCGTCATCAT AAGCACGGGG GCCTTTCTCG CCTTCCTGTT CCTGACCGGG
AAAAAACGCC CCGCGTCTCC CCGAGGTGGC CATGAAACCC ACTGA
 
Protein sequence
MLVAFALLPA PATAHTEEDL HKHGPFGTDA GAGDAAKFGL TERLGEKIPL DLTFRDETGA 
PVRLAALVTV PTIILPVYYS CTNVCNFLQG GLASVLKDVR QRPGEEYRVI SVSFDETETP
ELATKYKRTY LASMNAPFPE NGWRFLTGDA KNIRRLTDAA GFRFERRGRD FIHPVASIIV
ARDGTIVRYL YGTTFLPKDL SLALLEARSG KVGATIRQVV GYCFTFDPQA KTYVFNLLRV
SATIVIISTG AFLAFLFLTG KKRPASPRGG HETH