| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0142 |
|---|
| Symbol | |
|---|
| ID | 3739623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 171026 |
|---|
| End bp | 172267 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637777421 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_383116 |
|---|
| Protein GI | 78221369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.611176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAC TCATCGTGCG GTACGGCATG GTTGCCGTCG TGGCCGTCCT CGGGATCGCA
GCATCCCTGG GGCTGCGGGC GGCGCCGACG GAAGCGGCCC AGAAGTCGAA GTGCATCAGC
TGTCACGAGA AGGTGACGCC GGGGGTGGTG ACCCAGTTCC TCTCCGGCAA GATGGGCAAG
ACCCTGGACT GCTCCACCTG CCACGGCTCC GACCACCAGA CAGAGAAGGA CGTGGCAAAG
GTGAAGCTTC CCACCCCCGA AACCTGTGCC CAGTGCCACG AGAAACGGGT CAAGGAATAC
CGCGAAGGGA AGCACGCCCT GGCTTGGGTC TCCATGAAGG CGATGCCAAT GATCAACCAC
CAGCCATCGT CTGTGGGTGG CGGCGACCTC AAGGGGTGCT CGGCCTGCCA CAAAGTCGGC
GAAAAGCCCA TGGCCGACCT CACCCGCTAC GGCACTGGAG CCTGCGACTC GTGCCACACC
CGTCACTCCT TCTCGGTGAA GGAAGCCAGA GACCCTCGGG CCTGCCGCAC CTGCCACATG
GGCTTCGACC ATCCGCAGTG GGAGATGTGG CAAACCTCCA AGCACGGCAC CATCTGGGAG
ATCGAGCCGA CCACCGGTCG CGCCCCCACC TGCCAGACCT GCCACATGCC CGACGGCAGT
CACGGGGTCA TGACTGCCTG GGGCTTCCTG GCGCTGCGGG TTCCCGAGGA CGACAAAGAG
TGGTGGGACA ATCGCGTGAC CATCCTCAAG GCCATCGGTG TTCTTGACGA GAAAGGGCAG
CCCACCGAAC GTTTCGAGGC GGTGAAGGCA GCCAAGATAG CCCGGCTCAC CAAGGAGGAC
TTCGATAAGG AACGGAAAAA GATGATCGAC GTCTGCTCCA AGTGCCACTC CAGGAGCTAC
GCCGAGGCCA ACTTGAAGGC GGGCGACGAC ATCATCCGCG AGGTGGACAA GATCTTCGCC
GACTCCATCC GGACCGTGAA GGCCCTCTAC GACGACGGCA TACTCAAAAA GCCGGCCGAC
TGGAAGTACG CCCCTGATCT CCTCCAGTTC TACGAGGCGA AGAGCGCCGC CGAGCAGGAA
CTCTACCTGA TCTTCCTGGA ATACCGGCAG CGGGCCTTCC AGGGGGCCTT CCACGCAAAC
CCCGACTACA TGCACTGGTA CGGCTGGGCC AAGGTGAAGG AGGCCTCCGC CAGGATCAAG
GAGGACGCGG AACGCCTGAG GGCCGAGGCG AAAAAGCACT GA
|
|---|
| Protein sequence | MKGLIVRYGM VAVVAVLGIA ASLGLRAAPT EAAQKSKCIS CHEKVTPGVV TQFLSGKMGK
TLDCSTCHGS DHQTEKDVAK VKLPTPETCA QCHEKRVKEY REGKHALAWV SMKAMPMINH
QPSSVGGGDL KGCSACHKVG EKPMADLTRY GTGACDSCHT RHSFSVKEAR DPRACRTCHM
GFDHPQWEMW QTSKHGTIWE IEPTTGRAPT CQTCHMPDGS HGVMTAWGFL ALRVPEDDKE
WWDNRVTILK AIGVLDEKGQ PTERFEAVKA AKIARLTKED FDKERKKMID VCSKCHSRSY
AEANLKAGDD IIREVDKIFA DSIRTVKALY DDGILKKPAD WKYAPDLLQF YEAKSAAEQE
LYLIFLEYRQ RAFQGAFHAN PDYMHWYGWA KVKEASARIK EDAERLRAEA KKH
|
|---|
| |