Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3712 |
Symbol | |
ID | 6369515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010815 |
Strand | - |
Start bp | 62850 |
End bp | 63584 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642679125 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001953930 |
Protein GI | 189426754 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0912876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGA CAAAAGGCCC AAAAGTGGCT CTCATCGTCG GTGCAGGTGA TCACCTTGGC TCTGCAATTG CCAAACGCTT TGCCAAAGAA GGGTTTGCCA TCGTCGCAAC AAGACGACGA GGTGATCTGA CAGGCCTCAT CGATGAAATT GAGGCTCTTG GCTCACGAGC CTACGGCTTA CACTCTGATG CCAGAAACGA GGCGCAGGTT GCTGAACTGG TTGAGAAAGT GGAGTCGGAC ATCGGGCCGA TCGAGGTTGC AGTGTTCAAT GTCGGCGGTA ATGTGCGCTT TGGAATTTTG GAAACCACCG CACGGGTCTA TCAGAAATCT TGGGAGATGT GTGCCTTTGC CGGGTTTTTG ATTGGCCGGG AAGTCGCCCG GCGTATGGTG CCGAGAAAGA GCGGCACAAT CCTCTTTACC GGTGCCTCGG CGAGTCTACG CGGAGTAAGC GGCTTTGCTG CCTTTGCTGG CGGTAAACAT GCCCTTCGAG CCCTCGCTCA AAGTATGGCG AGAGAACTTG GACCACAAGG GATTCACATC GGCCATGTTG TGGTAGATGG CTTAATCGAA AACCGTTCAA CAGAAGAGCT ATTCCCAGAC TTGGTAGCCT CCAAAAGTGA AGACGGAATC ATCCAGCCCG ACCACCTGGC GGAAATTTAC TGGCATCTGT ACCAGCAACC CCGAACCGCC TGGACTTTCG AAATCGATGC CCGGCCTTAT TCAGAGCCTT GGTAA
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Protein sequence | MTKTKGPKVA LIVGAGDHLG SAIAKRFAKE GFAIVATRRR GDLTGLIDEI EALGSRAYGL HSDARNEAQV AELVEKVESD IGPIEVAVFN VGGNVRFGIL ETTARVYQKS WEMCAFAGFL IGREVARRMV PRKSGTILFT GASASLRGVS GFAAFAGGKH ALRALAQSMA RELGPQGIHI GHVVVDGLIE NRSTEELFPD LVASKSEDGI IQPDHLAEIY WHLYQQPRTA WTFEIDARPY SEPW
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