| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3679 |
|---|
| Symbol | |
|---|
| ID | 6369584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010815 |
|---|
| Strand | + |
|---|
| Start bp | 34843 |
|---|
| End bp | 37434 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642679093 |
|---|
| Product | cobyric acid synthase CobQ |
|---|
| Protein accession | YP_001953898 |
|---|
| Protein GI | 189426722 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
[COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ
[TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATC AGCTACCCCA TAGTGAGCAG TACCGCCACG GCGGCAATCT GCGGGCCTTA
AGCCGATTGT CCGGCCGGGC CCCGCACGAG CTGCTGGATT TCTCGGCCAA CATCAACCCG
CTGGGGCCGC CGGACTGGCT GCGCCCGTTG ATTGAAAGCC GGATCAGCGA GCTGGTGCAT
TACCCCGACC CCGAGGCAAG CGAGCTTGTG GCGGCGATCA GCACGCAGCA TCGGATTCCG
GCTGCAGAAC TGCTGGTGGG TAACGGTGCC ACTGAACTGC TGCACCTGCT GCCCCGGGCG
CTGGGTTGCA GCTCGCTATT GCTGCCGGTG CCCAGCTACA GCGATTACGA GGCCCCGGCC
CGGCTGCAGG GGCTGGCAGT CGAGCGCTTT ACCCTGGTGC CGGACAACGA CTTTCTGCTG
GATCCGCAGC AGCTTGCACC GCTGTTGAAG CCGGGGCAGA TGGTGCTGCT GGGCCAGCCC
AACAACCCCA CCGGCCGCAC CTTTGCTGCA GCAGCGCTGC GTGACCTGGC TGCCAGCCAC
CCAGCCAGCC TGTTTGTGGT GGATGAGTCT TTCATCGGTT TTACCGACGC CAGCCAGAGC
CTGCAGCAGG ACCGGCCCGC TAACCTGCTG GTGGTGACCT CCCTGACCAA GCTGTACGCC
ATTCCGGGCC TGCGGCTGGG TTACCTGACC GCTGCTGAAG CGCATATCCA GAAGCTGCGC
GCCTTTCTGC CTACTTGGTC GGTCAACTCC CTGGCCCAGG CAGTGGGGGC GCGGGCGGTC
CAGGATCAGG ACTATTTGCA GCAGACCCGC AGCATGGTGA CCCAGCAGCG GCAGCAATTG
GCCCAGATGC TGGGGCAGCT GCCCGGCCTG ACGATCTACC CCGGCGAGGC CAACTTCCTG
CTTTTGCGGT TGGATCACTC CACGCTGGAT GCCCCGCAAC TGGCTGAACA GACCCTTAAA
CAGGGGATCG CCCTGCGGAT TTGCGCCAAC TTTCAGGGGC TGGATCAACG TTACCTGCGG
GTGGCGGTGC GGACTGAAAC AGAGCAGCAG CAGTTATGCG GCGTCCTGCA TGCCATACTG
GAACCAACCC GCCAGCGCCC GGCCAGACGC CAGACCCCGG CGATCATGTT TCAGGGCACC
GGCTCCAATG CCGGCAAGAG CATCCTGACC ACGGCGCTCT GCCGCATCCT GAAACAGGAT
GGCCATGATG TGGCGCCGTT CAAGGCCCAG AACATGTCGC TCAACGCCTT TGTCACCCCC
CAGGGGGGCG AGATGGGCCG GGCCCAGGCA CTGCAGGCCC AGGCCTGCCG ACTTGAGCCG
GATGTGCGGA TGAACCCGGT GCTGCTGAAG CCCACCAGCG AGACCGGCTC CCAGGTGATC
CTGTGCGGCA AGGTGCAGGG CAGCACGGAT TTCCGTTCCT ATGCCCAGCA GCGGCAACAG
GTCTGGTCCA CGGTGCAGGG CTGCTATGAT GAACTGGCAG CAGAACATCA GGTCATGGTG
CTGGAAGGGG CGGGCAGTCC GGCTGAGGTC AACCTGAAGA CCAATGATAT CGTTAACATG
CGGATGGCAC AGTATGCTGG TGCGCCGGTC TTACTGGTGG GGGATATTGA CCGGGGCGGC
GTGTTTGCCT CCTTTGTCGG CACTATGGAA CTCTTAAACG AGGCAGAGCG GCACCAGGTG
GCCGGGTTTG TGATCAACCG TTTCCGGGGT GATGCCTCCC TGCTGGGGGA TGCCCTGGCC
TATACCCGCT TCCATACCAG CAAGCCGGTG CTGGGCACGG TGCCGTATTT GACCAACCTG
GGACTGCCGG AGGAAGATTC GGTTACCTTC AAGCAGGGGC TGCTGCCCTG CGGTGCTAAG
GATACACAAC TGCTTGATAT TGCGGTGCTT AATCTGCCCC ATGTTGCCAA CTTTACCGAT
CTTGACCCGC TGGGGCAGGA GCCGGATGTG GGTCTGCGGC TTGTCCGCAG CGCCGCAGAA
CTGGGGCAGC CCGATGCGGT GCTGATCCCT GGCAGCAAGA ACACCCTGGC TGACCTGGCC
TGGCTGCAGC AGACCGGCTT GGCAACAGCC ATCCTTGAAC TGGCACAGGC TGGACAGGTC
GAGATCATCG GCATCTGCGG CGGTTTCCAG ATCTTGGGTG AGCGGATTGG TGATCCCCTG
CAGATTGAAT CCACTGTTGG TGAGCAACAG GGGCTGGGGC TGCTGGCGAT CAGCACGGTG
CTGGCAGAAC AGAAGACCAC CCGCCAGACC CGCTGTTGCC ACATCCCGTC CGGCTGTATG
CTGTCCGGCT ACGAGATCCA CCACGGCATC ACCAGCGCAG ACCAACTGCA ACCACTGATG
AGTAGCCCGG ATGGCAGCCT GCTTGGAGCT GGTGATAATA GCGGCCTGGT TTGGGGCAGC
TACCTGCACG GCCTGTTTGA TGCAGATCCG TTCCGGCGCT GGTGGCTGGA TCGGTTGCGG
CAGCGCAAAG GCTGGCAGGT AAGCGGCGTT GTCAGGGCCT GCTATAATCT GGAACCAGCG
CTTGACCGTC TGGCTGACTG CGTACGGGAT AGTCTGGATA TGCGGGAGGT TTATCGGTTG
TTGGGGATAT AG
|
|---|
| Protein sequence | MPDQLPHSEQ YRHGGNLRAL SRLSGRAPHE LLDFSANINP LGPPDWLRPL IESRISELVH
YPDPEASELV AAISTQHRIP AAELLVGNGA TELLHLLPRA LGCSSLLLPV PSYSDYEAPA
RLQGLAVERF TLVPDNDFLL DPQQLAPLLK PGQMVLLGQP NNPTGRTFAA AALRDLAASH
PASLFVVDES FIGFTDASQS LQQDRPANLL VVTSLTKLYA IPGLRLGYLT AAEAHIQKLR
AFLPTWSVNS LAQAVGARAV QDQDYLQQTR SMVTQQRQQL AQMLGQLPGL TIYPGEANFL
LLRLDHSTLD APQLAEQTLK QGIALRICAN FQGLDQRYLR VAVRTETEQQ QLCGVLHAIL
EPTRQRPARR QTPAIMFQGT GSNAGKSILT TALCRILKQD GHDVAPFKAQ NMSLNAFVTP
QGGEMGRAQA LQAQACRLEP DVRMNPVLLK PTSETGSQVI LCGKVQGSTD FRSYAQQRQQ
VWSTVQGCYD ELAAEHQVMV LEGAGSPAEV NLKTNDIVNM RMAQYAGAPV LLVGDIDRGG
VFASFVGTME LLNEAERHQV AGFVINRFRG DASLLGDALA YTRFHTSKPV LGTVPYLTNL
GLPEEDSVTF KQGLLPCGAK DTQLLDIAVL NLPHVANFTD LDPLGQEPDV GLRLVRSAAE
LGQPDAVLIP GSKNTLADLA WLQQTGLATA ILELAQAGQV EIIGICGGFQ ILGERIGDPL
QIESTVGEQQ GLGLLAISTV LAEQKTTRQT RCCHIPSGCM LSGYEIHHGI TSADQLQPLM
SSPDGSLLGA GDNSGLVWGS YLHGLFDADP FRRWWLDRLR QRKGWQVSGV VRACYNLEPA
LDRLADCVRD SLDMREVYRL LGI
|
|---|
| |