Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3675 |
Symbol | |
ID | 6369580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010815 |
Strand | - |
Start bp | 27969 |
End bp | 30182 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642679089 |
Product | TonB-dependent receptor |
Protein accession | YP_001953894 |
Protein GI | 189426718 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0831004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAA ACAGGCAGAA GTGTGCCGTG GTGGTGGGGC TGGCGCTGGC AGCGTGCAGC ACCGCACAGG CGGAGACTGT TCCTGGCGAA GCCAGGCTTG AACAGGTTGT GGTGACGGCA ACCAGAACTG AACAGGATCT GGCAACGGCA CCGGGCAGTG TCTCCGTTGT AACAAAGGAG GAAATGGAAA AACGGAATAT CACGACAGTA GACGAGGCGA TTAATACCAC TCCTGGCGTA CTCTCTACTC GGGGCAAAGG GATGATGGAC CGGATGTCTG CCATTACCCT GCGCGGTATT CCGGGGCAGT CCCGCACGCT GGTGATGCTG GACGGCATTA CCATCAACAG CCCTTACGCC GGATCGGTGG TGTCCGTAGG TATTTCACCC AGCAGCCTTG AACGGATTGA AGTGGTTAAA GGTCCGGCCT CCAGTCTTTA CGGCGGATAT GCCATGGGGG GGGTGGTCAA CATGATCACC CGAATGCCTG AAAAGCGGGA ACTAACCCTG ACTGGCGGTT ACGGTTTTGC TTTGGACAGT CCCAACGGCA TGCAAAATAC CAGACGGGTT GCCGCCTCCT ACGGTGACAA GTATCTGGGG AAAATCAAAC TCTACCTGCA TAACGACTAT CTGGCCACCG ACGGCTACCG CAGTGACACC AACGTACAAA GCAGCAAACC GACTGCTGGT ATCACTGGCT GGGAGCCGAC CACTGATTAT ACCGGCGCAA CCCGCTATCG GCTGGGAGAC AAAGGCAAAA ACGGTGCCTG GCAGGACAAC CTGACCGCCA AGGCAGAGCT CGAACTTCCT TCCAATACGA AGCTCAAGCT GACTTTTATG AAGTCAACCG GCGAATATTC CTACGACAAT CCGGCCACCT ACCTGCGCAA CAGTAGCGGC GCTGAAGTCT GGAGCTACGG CACAGTACGG GAGGCATCCT TTCTCGGGGG AAATGGCGGC AGTGATCAGC ACCTGTATGG ATTTAGCGCT GAAACAGAGC TGGCAACGGT CAAGTACAAG CTGAATCTGG GGTATCTTGA TCAGATGACC AGTTGGGGAA CCACGCCCAC CTCGGCTGCG CCGCCCAACG GCGGTACCCG TAACGGCGGG CCGGGCAAGC TGTCCGATAC CCCGGCAGCC GCCTTTAATG CCGATATTCA GGCTTCAATA CCGATTCTGG ATAAGCATCT GTTGACCGTG GGTGGCGCCT ACCGCACCGG CTGGTCCCAT TCCAGAGAGC ACAATCTCTC AAACTGGCAG GATGAAAACT CCAAAGGAGC CCTGACCTAC GAATCAAAGG GTACCGACCG CACCTTTGCC CTGTTTGCCG AAGGTGAAAT AGCTCTGCTG GACAAACTGA CCCTGTTTGC CGGATTCCGG CAGGACTGGT GGGATACCTT TGACGGTTAT GCCAATCAGG TCGGCAGTGT TGGCTATCCT CAAACCTACG GTTCCCGTAG CGCCGATGCC TTCAGCCCCA AAGGCGCGCT GGTATACAGA CCGTTTGACA CAACCACGTT CAAATTATCC GGCGGCAAGG CATTTCGGGC GCCCACAGTG TATGACCTCT ACCGCACCTG GACCACCTCC AGCGGCACCA CCTACGCCGG AAACCCCAAC CTGAAACCGG AAACCGTCAT TTCCTGGGAT GCAGGTGTCA GCCAGCGGCT CTGGAAAGGT TCCAAATTTA CCGCCACCTA TTTTGAGAAC TACATCAGTG ACCTGATCTA CAGCACTTCA ACCACCCCCA CCTGGAAAGA CAAGGCCAAC GCAGGTAAGG CCGAAAGCAG AGGGGTAGAG CTTGAGGCAG AACAGAAGTT TGACTCCCTG TTGCGGTTGT TTGCCAATTA CACCTACACC GACGCAACCA TCAAGGAAAA CAGTGCAGTT CCCGCAACCG TAGGCAAACG GGTAACTGAT GTGCCGGAAC ATATGTTCAA TCTGGGGGCT GATCTGGATT ACGGCAGTTT TGGGGCCACA GCAACCGGTC GCTATGTGGG TAAACGCTAT TCCAGCGACA CCAACACCGA CACCGTCAAC GGCGTACAGG GCAGCAATGA CCCCTATTTC ACCGTGGACC TGAAGTTGCG TTACAAAATT ACCGCCTGGG CCACCGCCTC GTTGGCTGTC ACCAACCTGT TTGACGAGCA TTACTACTCT TCCTCCCTGG CGCCGGGCCG TTCCTGTTAT GCAGAACTGG GCTTCAAGTT TTGA
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Protein sequence | MKRNRQKCAV VVGLALAACS TAQAETVPGE ARLEQVVVTA TRTEQDLATA PGSVSVVTKE EMEKRNITTV DEAINTTPGV LSTRGKGMMD RMSAITLRGI PGQSRTLVML DGITINSPYA GSVVSVGISP SSLERIEVVK GPASSLYGGY AMGGVVNMIT RMPEKRELTL TGGYGFALDS PNGMQNTRRV AASYGDKYLG KIKLYLHNDY LATDGYRSDT NVQSSKPTAG ITGWEPTTDY TGATRYRLGD KGKNGAWQDN LTAKAELELP SNTKLKLTFM KSTGEYSYDN PATYLRNSSG AEVWSYGTVR EASFLGGNGG SDQHLYGFSA ETELATVKYK LNLGYLDQMT SWGTTPTSAA PPNGGTRNGG PGKLSDTPAA AFNADIQASI PILDKHLLTV GGAYRTGWSH SREHNLSNWQ DENSKGALTY ESKGTDRTFA LFAEGEIALL DKLTLFAGFR QDWWDTFDGY ANQVGSVGYP QTYGSRSADA FSPKGALVYR PFDTTTFKLS GGKAFRAPTV YDLYRTWTTS SGTTYAGNPN LKPETVISWD AGVSQRLWKG SKFTATYFEN YISDLIYSTS TTPTWKDKAN AGKAESRGVE LEAEQKFDSL LRLFANYTYT DATIKENSAV PATVGKRVTD VPEHMFNLGA DLDYGSFGAT ATGRYVGKRY SSDTNTDTVN GVQGSNDPYF TVDLKLRYKI TAWATASLAV TNLFDEHYYS SSLAPGRSCY AELGFKF
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