| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0905 |
|---|
| Symbol | |
|---|
| ID | 6366947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 935795 |
|---|
| End bp | 936901 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642676300 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001951148 |
|---|
| Protein GI | 189423971 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCA ACTCGTTAAG CGGACGTGCC ATAGCTGTGT TGGCGGCATG TATTTTTACT
GCCTTTGCCG CATTTTCCAT ACGCTACAGC TACGGCGTAC TTCTGCCTGA AATGCTGTCT
CCGCTCGGCA TGACAAAGAC ACAGGCGGGT ACCATCTACG CATCCTATTT TGCGATTAAC
TGCCTGTTAT CACCTGTTGT AGGGATTATC TCTGACAGGT GTAATCTGCG GATGCTGCTC
ACTGCATTTG TCGTACTCAT GGGAACGGGA ACATTCCTCA TGCAGTATGC AACATCTGTC
ATGCAAGCGT CTGCTTGTTT TGCGCTGGCA GGGATGGGGG CTGCCGCTTG CTGGGCCCCG
GTTATGGTGA TAGCCCAGAG ATGGACCGGC GACAGCATAC GTGGCACGGT CCTTTCCCTG
GTGGATGCCG GCAGCTCGCT CGGGGTGATG GCTGCCGGCA CACTTGTCCC GCTCTTTGTG
GCCAGGTCAG GCTGGCAATC CGGGTGGACT TTTCTGGGAT TGATGGCAGT TACGGCTGGA
GCTGTAAACT TTATCTGTAT CCGTAATCGT CCCCCGCAGG TTCCTGACGT TTTGGTAACT
GAAAAAAAAT GCGCTATCTT GGGTAGTGAA CCGGTAATCA GCTACAGATC CCTGTTCAGC
AACCGGCTTT TCTGGATAAT TGCGCTGGCT TACCTGTTCA ACGGGTTTGC CATAATCATC
CCCTTTACCT TTCTCAACAC CTATGCCTGT AAAGAGCTTG CAATGTCATA CGAAGCAGCA
GGCTTCCTGA TTACCCTTAC AGGCATTGGC GGCCTTGTCG GAAAACTTGT TCTTGGGCCG
CTTTCAGATA CATTTGGGCG CGTAGTCATT ATGCTCGTTT GCGCTGTTCT TGTGACCATG
GGGGCCTTGG GGATGGTCTG CAGCACGGGA GCTGCACTGC AGACGGTCAC CTTTCTCTTT
GGGGTTGGCT ATGGCGCCTG CTGGGGCATG TACGCTGCAT GCGCCTCTGA CTATTTTTCT
AAAAAGTTGA TCGGAGCCAT CCTCGGAACC TGGTCGTTGT ATCTGGGTGT GAATCGGCAT
GCAATATTGA CCCACTTTCG GGTGTAA
|
|---|
| Protein sequence | MGINSLSGRA IAVLAACIFT AFAAFSIRYS YGVLLPEMLS PLGMTKTQAG TIYASYFAIN
CLLSPVVGII SDRCNLRMLL TAFVVLMGTG TFLMQYATSV MQASACFALA GMGAAACWAP
VMVIAQRWTG DSIRGTVLSL VDAGSSLGVM AAGTLVPLFV ARSGWQSGWT FLGLMAVTAG
AVNFICIRNR PPQVPDVLVT EKKCAILGSE PVISYRSLFS NRLFWIIALA YLFNGFAIII
PFTFLNTYAC KELAMSYEAA GFLITLTGIG GLVGKLVLGP LSDTFGRVVI MLVCAVLVTM
GALGMVCSTG AALQTVTFLF GVGYGACWGM YAACASDYFS KKLIGAILGT WSLYLGVNRH
AILTHFRV
|
|---|
| |