Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0576 |
Symbol | |
ID | 6367923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 559096 |
End bp | 560961 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642675968 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001950823 |
Protein GI | 189423646 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACCGTA TCTGCAGCAA TAAAGTATTG TTGATTCTGC CGATACTGGT ATGCCTTACG GCCATGCCGC TCTTTGCTGC CGATGATGCC CTGGAGGATC TGGGTATTAT TGAGGCCCAG GCTGAATCGG TTGTCTCTGC CTCTCGCAGC CCCCGTCCCG CCTCCCGCAT TGCAGAAAAC ATCACCGTCA TCACTGCTGA CGACATTGAA CGCCTGAATG CCCATACCCT GGCAGAGGTG CTGCAGACCG TGCCGGGCAT CCAGCTTGAT TTTTTGCGCA CCCCCGGCAC ATTCAGCTTC TTTAATGTCC AAGGTGCCTT GAATACCACG GTGCTGGTGC TGGTGGATGG TATCCGCCAG AATGATTTTG ACCAGAACAT GGCTATTGTT GGCCTGATTC CGGTGCAGCA GATTGAGCGG ATCGAGATCA TCAAAGGGGC AGCCTCAGCT GCCTGGGGAC CGGCCCTGGG CGGGGTGATC AATATCATCA CCAAATCCCC TGATGCTGAG CGCAAGTTCA GCGGCATGGT GTCCGGCTCC ACTGGCTCTC AGTTCACCGC AGATTCCCGC GCAGAAGTCA GCGGCACCCT GGATCGTTTC GGCTATTATC TGACTGTTGC CAACCTGCGT TCCGATGGCC TGACCCCCAA TACCGGCACC AACCAGAACA ACCTGTTTAC CAAACTCTCC TACCAGTTAC CCCACAATGG CAGCCTTACC TTTGGCCTGT CCTACCTGAC TGCCAGTCCG GGGCTGGATG AAGGGGAAAC AGTGAGCTGG GGCTTTGTCC ATGACAACAA CCAGTATCGC CGCACCAATG CCTACCTGAA GCTTAACCAG CCCCTGACTG ACCGGTTAAC CCTGGAACTG GACAGCTTTC TGACCAACCG TGATGACCAT ACCAAGTTTG GCGGCTTGGA TGGCTCAGGT AATCTGACCT TTTTTAATGA CTATGTGGTG CGGGACACCA ACCAGGGGAT CAATGCCCGT CTGCGCTGGG GCGACTACCA GAAGAGCCTG CTGCTGGGGC TTGATTATAG CCATGCCTGG GCCATCAACA GGGATGCGTT AAGCAGTGAT CCGCCAGTCT ATGACCGGAG CTGGGACCGC TGGGGCATCT ATGCAAATGG TGCCTATACG GTGGGACAAC TGACCATTCT GCCCGGTGCC CGTTATGACA TTACCGGCAC CTCTGGCGAT GTCACCAGCC TGACCCTGGG GGCCACCTAT CAGCTGGCTG AACATACGTT GCTGCGGGCC TATGCTGCCC AGGGCTATAC CCTGCCCACA CCCCGTGCCG ATAACAAGCT GCAAAAGATC AAGACCATTC AGGCCGGGAT CGAGAGTGAG GCGCTGCCTT TTCTCTGGCT GAAGGGGACC TTTTTCTTTA ATGCCCTGCG TGACAGCCAA TCTATCGGTA CCGTAACCAC CACCAACCAG CAGCGCCAGG GGATTGAGCT GGAGGCCCGC ACCGCGCCGC TGTACGGTCT TTCCCTGACC AGTGGCTATA CCTACCTGGA TGCCTGGGAC AGTGATACTG GCCAGCGTCT GCACACCAAC TATAATCAGG CGGTTCCGCC CCACACCGTG AAACTGGCCT TGAACTACGA TAACCGTGAG CTGGGGCTGC GCGGTACTGT AACCGGTAAC TATGTCTGGT GGAACAGGGA TGAAAGCACT GCTGCCCGTG ACACCGGCAT GATCTGGGAT CTGCATCTGA ACTGGCGGTT GAAGTCATTT TATAAACTGA CACCGGAGTT GTTCTTCTCT GCCCACAACC TGTTCAACGG TGTACAGACT ACGGATACCG AGTTATACAC CAATGCCAAG CGCTGGTTTG AAGGCGGCCT GCGGGTGAAG TTCTGA
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Protein sequence | MNRICSNKVL LILPILVCLT AMPLFAADDA LEDLGIIEAQ AESVVSASRS PRPASRIAEN ITVITADDIE RLNAHTLAEV LQTVPGIQLD FLRTPGTFSF FNVQGALNTT VLVLVDGIRQ NDFDQNMAIV GLIPVQQIER IEIIKGAASA AWGPALGGVI NIITKSPDAE RKFSGMVSGS TGSQFTADSR AEVSGTLDRF GYYLTVANLR SDGLTPNTGT NQNNLFTKLS YQLPHNGSLT FGLSYLTASP GLDEGETVSW GFVHDNNQYR RTNAYLKLNQ PLTDRLTLEL DSFLTNRDDH TKFGGLDGSG NLTFFNDYVV RDTNQGINAR LRWGDYQKSL LLGLDYSHAW AINRDALSSD PPVYDRSWDR WGIYANGAYT VGQLTILPGA RYDITGTSGD VTSLTLGATY QLAEHTLLRA YAAQGYTLPT PRADNKLQKI KTIQAGIESE ALPFLWLKGT FFFNALRDSQ SIGTVTTTNQ QRQGIELEAR TAPLYGLSLT SGYTYLDAWD SDTGQRLHTN YNQAVPPHTV KLALNYDNRE LGLRGTVTGN YVWWNRDEST AARDTGMIWD LHLNWRLKSF YKLTPELFFS AHNLFNGVQT TDTELYTNAK RWFEGGLRVK F
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