Gene Glov_0544 details

Gene Information

• Locus tag: Glov_0544
• ID: 6367615
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: -
• Start bp: 515896
• End bp: 516555
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642675937
• Product: ABC transporter related
• Protein accession: YP_001950792
• Protein GI: 189423615
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAACCG CACACCATAT AACCAAAGAG TATCCCTCCG GCGAAGGCGC CGTAGCAGCA 
CTCCGGGGGG TCGATCTGAC AGTGGAGACC GGCGAGTTTG TCTGTATCAT GGGGCAGTCC 
GGCTCCGGCA AGAGCACCCT GCTGACCATT CTGGGGGGGA TGTGCCACCC CGGCAGCGGC 
AGCGTCGAAG TGGACGGCAC GGCCATCTAC AGGCTTGATG ACAACGGCCT GGCAGATTTT 
CGCGCAAGGC ATTTCGGTTT TATCTTCCAG TCCTTTCATC TGGTGCCCTA CCTGACAGCA 
CAGGAAAACG TCATGCTGCC GCTGGCCCCG CTGGCCATGG CCGCTGCGGA AAAACGGCGT 
CTGGCAAATG ACGCTCTGGC ACGGATGGGG CTGGCCGGCT GCACCGGGCG CCTGCCCGGC 
CGGCTGTCCG GTGGGGAACA GGAACGGGTT GCAATCGCGC GGGCCGTGGT CAACCGTCCG 
GCAATCCTGT TTGCCGATGA GCCGACCGGC AATTTGGACA GTGCCACCAG CGACCAGGTC 
ATGGGGCTTT TTACAGAGCT GCACCAGGCG GGCCAGACCA TCGTGATGGT CACCCACAAC 
CCGGATAACG GCCACTACGC TCAGCGGACG ATCCGCCTGA AGGATGGGCT GCTGCTCTGA 

 

Protein sequence

MITAHHITKE YPSGEGAVAA LRGVDLTVET GEFVCIMGQS GSGKSTLLTI LGGMCHPGSG 
SVEVDGTAIY RLDDNGLADF RARHFGFIFQ SFHLVPYLTA QENVMLPLAP LAMAAAEKRR 
LANDALARMG LAGCTGRLPG RLSGGEQERV AIARAVVNRP AILFADEPTG NLDSATSDQV 
MGLFTELHQA GQTIVMVTHN PDNGHYAQRT IRLKDGLLL