Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0408 |
Symbol | |
ID | 6366157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 388694 |
End bp | 390883 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642675800 |
Product | glycoside hydrolase family 57 |
Protein accession | YP_001950656 |
Protein GI | 189423479 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACGC CGATTGACGT CATATTCCTT TGGCACATGC ACCAGCCCTA TTACAAGGAC CCGGTCAAGG GGGAGTACGC CCTGCCCTGG ACCTATCTGC ATGCCATCAA GGATTATTAC GACATGCCGG CCATTGTGGA GGACACACCA GGGGCCAGGG CGGTCTTTAA CCTGGTGCCG TCATTGGTGG AGCAGTTGCT GGAGTATGCT GCCGGTACGG CAGTGGACCC CTTTCTGATC AAGGGACAGA TGAATCCGGC AGATATGTCT GAAGAAGACC GGATCTTTTT GCTGGAAAAC TTTTTTTCAG CCAACCGGCA GCGGATGATT GAGCCGCACC GCCGTTACCT TGAGTTGCTC TACATGGCTG GCGAAGGCAA ACCAGGTGCC GTACGGGAGC GGGTCAGGCA TTTCAGCCAT CAGGACCTGC AGGACCTGCA GGTCTGCTTC TTTTTGTCCT GGACCGGCGA GGCGGCTCGT CGTCGCTTTC CTGTCTTTCA GGAGCTGCTG GCCAAGGGGC AGGGCTATAC GGCAGAGGAC CGGGCCCTGC TGTTTGCCAC CCAGCACAAG CTGCTGAACG AGATTGTGCC GCTCTACAAA CGGCTGCATG CATCAGGACA GATTGAGCTG TCGGTCACCC CCTATTTCCA TCCGATCCTG CCGCTTTTGT GCGATACACA GCTGGCGCGG GAGGCGATGC CAAAGGTGAC GCTGCCCCAG GAGCGGTTCC GCCATCCGGA GGATGCCCGG GCCCATATTG GCCATGGGCT GCGTTATTTC CAGGAGGTCT TCGGCATCAC ACCCCGGGGG ATGTGGCCTT CTGAAGGTTC GGTCAGTGAC GAGGCCCTGC AGTTGATCCG CGAGTGTGGC CTTAGCTGGG TGGCTACCGA TGAAGAGGTC TTGGCCCGCT CGCTGGATGG CGGTCTGGGG CCGCATCATG AACGGCTCTA CCATCCCTGG CGCTTTGCCA CTGCCAAGGG AGATCTGGGG ATCTTCTTCC GTGACCACCA GCTTTCCGAC CTGATCGGCT TTACCTACAG CCAGTGGGAT GCCCGCCGGG CAGTGGCCGA CTTTACCGGG CGCCTGCGCC AGATCGGCCG CCAGGTGGGC AGTGAAGGCA AGGTGATCCC GGTCATCCTG GATGGTGAGA ACGCCTGGGA GTTCTATCCG GACAATGCCT ATGACTTCCT GTCCGGCATC TATGCCGCTG TTGCCGAGGC CCGGGATCTC AATCTGACCA CCTGTAGTGA TGTCCTGGCC CAATCAAGTT TTGAAGGCCG TCTGCACCGG ATTCATCCCG GTTCATGGAT CAATGCCAAC TACGGCATCT GGATCGGCCA CCCAGAGGAG AATCTGGCCT GGGATCTGGT GGCAGGCGCC CGCCGGGCGA TTGTGGAACA TCACCCCGAA GCCGCCCGTC AGCTTGCCAA CGCCGGTATG GATGGCGATC AGGTGGCCCG CCTGCTCTGT ACCTCGCTCT ACGCAGCCGA AGGCAGCGAC TGGTTCTGGT GGTTTGGTGA CGACCACTTC TCGCCCCACA GTGATCGTTT TGACCGGCTG TTCCGTCAGC ATCTCACCAA TATCTACACC ATGCTGGGAA TCAGTCCGCC CCGGGAGTTG CTGGAGCCGA TCAAGAAGAA GAGCCCCGCA GGTCTGGTGC GTGAACCGGC CGGTTTCATC GAGCCCGAGA TCAACGGCCG GGTGGGCGAC TACTTTGAAT GGCTGGCAGC CGGCCTGTTT GACCTGACTC GCCAGGGGTC TGCCATGCAC TCGTCTGATC GCCTGCTGCA GGGCTTTTAC TGGGGCTATA ACCATGCTCA GCTCTACTTC AGAATTGACG GTATCCAGGA ACTCTCGCGC CTGTTGAAAG AGAACGACAT CCTGGCCCTG CATCTGATTG CCGACCGGGA ATACCGTCTG CCGATGCAGC GCAGCATGGA AGAAGGGCTG TTACTGGTAA GGGAGCTGGG CAACTGGACC CCTACCAACA GCTGCTGCCG CTGGGCCATT GACCGAACCT GCGAGGTGGC ACTGCCGCTG GAAGGGCTGC ATCTGCTGCC GAAATCCAAG CTGTTTGCCA GTGTGACCCT GACCCGTAAC AGCGAAGAGA TCGGGCGCTG GCCGTCGGAT GCGCCGTTGA TGCTGAATTA TGAAGGGCCG GACCTGGAAG CAAATGACTG GCTGATTTGA
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Protein sequence | MTTPIDVIFL WHMHQPYYKD PVKGEYALPW TYLHAIKDYY DMPAIVEDTP GARAVFNLVP SLVEQLLEYA AGTAVDPFLI KGQMNPADMS EEDRIFLLEN FFSANRQRMI EPHRRYLELL YMAGEGKPGA VRERVRHFSH QDLQDLQVCF FLSWTGEAAR RRFPVFQELL AKGQGYTAED RALLFATQHK LLNEIVPLYK RLHASGQIEL SVTPYFHPIL PLLCDTQLAR EAMPKVTLPQ ERFRHPEDAR AHIGHGLRYF QEVFGITPRG MWPSEGSVSD EALQLIRECG LSWVATDEEV LARSLDGGLG PHHERLYHPW RFATAKGDLG IFFRDHQLSD LIGFTYSQWD ARRAVADFTG RLRQIGRQVG SEGKVIPVIL DGENAWEFYP DNAYDFLSGI YAAVAEARDL NLTTCSDVLA QSSFEGRLHR IHPGSWINAN YGIWIGHPEE NLAWDLVAGA RRAIVEHHPE AARQLANAGM DGDQVARLLC TSLYAAEGSD WFWWFGDDHF SPHSDRFDRL FRQHLTNIYT MLGISPPREL LEPIKKKSPA GLVREPAGFI EPEINGRVGD YFEWLAAGLF DLTRQGSAMH SSDRLLQGFY WGYNHAQLYF RIDGIQELSR LLKENDILAL HLIADREYRL PMQRSMEEGL LLVRELGNWT PTNSCCRWAI DRTCEVALPL EGLHLLPKSK LFASVTLTRN SEEIGRWPSD APLMLNYEGP DLEANDWLI
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