Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3486 |
Symbol | |
ID | 6976938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3816752 |
End bp | 3817630 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643393007 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_002277826 |
Protein GI | 209545597 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0314928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGGC GTATCCTGCT GATAGTCGTT GCCGTGTCCG GTCTGATCGG CGTGGTGATC CTGGGACGGC TGGCGCTCCA TTCGGGTGAG AAGCCCGTGG TCGCGCAGGT CACGGAAAAG AAGGTGCCGA CCGTCGGCGT CCTGGTTGCG CGGAAGGCGG AGCCGGCCGG TGCCTTGTTG CAGTCCGGGG ATCTTCAGAC GAAAGATTTT CCCGCCAACC TGGTGCCCCC CGGTGCGATT CACGACGTGC CGTCCGAACG CGCGGCGTTG ACGGGCGGGT TGCTGCGCGT GCCGGTTCCC GAGGGCGGCC TGCTGACGAA TGAAGCCGTG CTGCGCGTCG GCGATCACGG GTTTCTGGCA GCCGTATTGA AGCCCGGGGA TTCAGCCGTC AGCGTCGGTG TCGACTCCGT TTCGGGGGTG GCCGACCTGA TCGAGCCTGG GGATTATGTC GATCTGATCG TGACCCATGA TGTGGCGACG GCCGACGTCG CCAATTCGGG GGGTGGGGCA GGCGGCAATC CGGGCGGGGA CGCGGGTGGC GGTCGTATTG CTGCCGAAAC GGTCCTGTCC GCCTTGCGTG TCGTGGCCAT CGATCGTGAA ATGCAGCATA CGAGCACTGT CGACAGCCGG GGAGTGGGTA ACCGGACGGT CACGCTGGAG GTGACACCGG CCCAGGCTGA GGCTGTCGCC GTGGCGGGGC GGCTGGGGCG CCTGACCCTG GCGGTCAGGT CGCTCGATCA GGCCGGGGTC GCGGCTTTTG CCCCGCATAC GACATGGGGT GGCGATGTTT CGCCCGCGCT GGCGCATGGC CCGGAATCCG ACGCGGAGAC GGTGCACCTT TATAATGGGA CCGCGGATCT AAAAGATGTT CATTTCTAG
|
Protein sequence | MIGRILLIVV AVSGLIGVVI LGRLALHSGE KPVVAQVTEK KVPTVGVLVA RKAEPAGALL QSGDLQTKDF PANLVPPGAI HDVPSERAAL TGGLLRVPVP EGGLLTNEAV LRVGDHGFLA AVLKPGDSAV SVGVDSVSGV ADLIEPGDYV DLIVTHDVAT ADVANSGGGA GGNPGGDAGG GRIAAETVLS ALRVVAIDRE MQHTSTVDSR GVGNRTVTLE VTPAQAEAVA VAGRLGRLTL AVRSLDQAGV AAFAPHTTWG GDVSPALAHG PESDAETVHL YNGTADLKDV HF
|
| |