Gene Gdia_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3482 
SymbolfliM 
ID6976934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3813764 
End bp3814951 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID643393003 
Productflagellar motor switch protein FliM 
Protein accessionYP_002277822 
Protein GI209545593 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.138981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.137747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACG GGGACGACAC GACGAAGGGA GCCGACCACC ACGAGACGGC CGCCGGATCC 
CAGCCGGAGC CCGTGCATGA GGCCGCGCCT GCCGGGGCAG GCGGCGGGCA CGCCGCCAAG
GAAGACAGTT CGCCCGCGAT GGCTCATGAC GATATGGGTG GTCACGTGCT GGACCAGTCC
GAAATCGACA GCCTGCTGGG GAACGCGTTC GGCGGGCTTC CCATCAAGGA AGAGTCCGGC
CTGGAACGGG TCATCAAGGC AGGGTTCGTG GCCTACGAAC GCCTGCCGAT GCTGGAGATC
GTATTCGACC GCCTGGTCCG GATGTTGTCG TCCACGCTCC GCAGCTTCAC GAACGACAAC
GTCGAAATCA CCATCGACGG CATGCGCTCG ATGAGCTTCG GCGACTATAT GAATGCCGTG
CCGTCATCGT CCCTGTTCGC GGTCTTCAAG GCCGTGCAAT GGGAAAATTA CGGCCTGATC
GTCATCGATT CCGCGCTGTC CTACTCGATC ATCGACATCC TGATGGGTGG TCCGCGCGGG
GTCGGCTACG CAGGGGTGGA AGCGCGCCCA CATACCGCCA TCGAAAGGGC GCTGATCGAA
AAGCTCGTCA CGTTGACGCT CAACGATCTT TCCACGGCCT TCAATCCGGT CTGCACCATC
GACCTGACGT TCGAGCGGCT TGAGGTCAGT GCGCGCTTCG CCGCGATCGC ACGCGCCTCG
AACGCCGTCG TGATGACCAA GCTTCACATC GACATGGAGG ACCGGAGCGG AAGCCTGGAC
CTGATCATTC CCTACGTGAC GCTGGAACCT GTCCGCGATC AGTTGTCCCA GCAATTCATG
GGCGAGCGGT TCGGACGCGA TTCAAAATGG GAAGGTCACC TGGTTTCCGA AATTCTCGAA
ACCGACATCC AGGTTTCGGC GGTATTCGAG GAAAAGACGA TTCTGCTTTC GGAGGTCCTC
GGCCTCCGTC CCGGCATGCT GATCAGCTTT CCCCATCAGA ACGGAACACC GATCCACGTC
CGGCTCCAAT GCGGCCAGAC CCCCCTGTTC GAGGGACGGC TGGGAAAACT GCAGGACAAG
GCAGCCGTTA AGATCGAGAA GAGGCTGGTG CCACCCGCTG GGCCGCACAT GAACGAGGCG
GCCGTTCCCG ATCCGGCCCC GCCAGACGAG CAGAAGACGC AAGCCTGA
 
Protein sequence
MQDGDDTTKG ADHHETAAGS QPEPVHEAAP AGAGGGHAAK EDSSPAMAHD DMGGHVLDQS 
EIDSLLGNAF GGLPIKEESG LERVIKAGFV AYERLPMLEI VFDRLVRMLS STLRSFTNDN
VEITIDGMRS MSFGDYMNAV PSSSLFAVFK AVQWENYGLI VIDSALSYSI IDILMGGPRG
VGYAGVEARP HTAIERALIE KLVTLTLNDL STAFNPVCTI DLTFERLEVS ARFAAIARAS
NAVVMTKLHI DMEDRSGSLD LIIPYVTLEP VRDQLSQQFM GERFGRDSKW EGHLVSEILE
TDIQVSAVFE EKTILLSEVL GLRPGMLISF PHQNGTPIHV RLQCGQTPLF EGRLGKLQDK
AAVKIEKRLV PPAGPHMNEA AVPDPAPPDE QKTQA