Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3370 |
Symbol | |
ID | 6976815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 3692584 |
End bp | 3693048 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643392885 |
Product | Holliday junction resolvase YqgF |
Protein accession | YP_002277711 |
Protein GI | 209545482 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.13465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGT TCAACATGCA CCAGATCCGC GGCCAGCTTG GCCGCGACCA ACGGCTGCTG GGACTCGATC CCGGCCAGAA GACGATCGGC CTGGCGCTGT CGGACGTGTC GCTGATGCTG GCCTCGCCCT ACGGCGCATT GCGGCGGGGC AAGCTGTCGG TGGTGGCGGC CGAGATCCGG CGCATCGCCG CGCGCGAAGG CGTGGGGGGG CTGGTGTCCG GCCTGCCGCT GTCCATGGAC GGCAGTTTCG GCCCGGCGGC CCAGGCGGCG CGCGACTGGA TGATCAGCCT GTCCGAACAG GTCGGCCTGC CGGCGGCGAT GTGGGACGAA CGCCTGTCGT CCAGCGCCGT GAACCGCATG CTGATCCAGG ATGCGGACAT GACCCGGCAG CGCCGCGCCG AACTGGTGGA CAAGCTGGCC GCGTCCTACA TGCTGCAGGG CGCGCTGGAC GCCACGGCGG AATGA
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Protein sequence | MPLFNMHQIR GQLGRDQRLL GLDPGQKTIG LALSDVSLML ASPYGALRRG KLSVVAAEIR RIAAREGVGG LVSGLPLSMD GSFGPAAQAA RDWMISLSEQ VGLPAAMWDE RLSSSAVNRM LIQDADMTRQ RRAELVDKLA ASYMLQGALD ATAE
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