Gene Gdia_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2912 
Symbol 
ID6976346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3190352 
End bp3191137 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID643392421 
Productshort chain dehydrogenase 
Protein accessionYP_002277258 
Protein GI209545029 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.07408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCGA TTCCCGCTGC GATTCCGCGC GTTGCCTTCG TCACCGGGGG CGCGGTTCGT 
CTGGGGCGGG CCATGGCCCT GGCGCTGGCC GATGCCGGGT TTTCGGTCGC CATCCATTAC
CGCTCCGGCC CGGACGAGGC GCGCCGCACC GTGGAGGAGA TTTCGGCCCG GCGGCAGCGC
GCCTGCATGC TGGCGGCCGA CCTGGCGGAC GAATCCCAGG TGATGTCGCT TCTGGCGCGG
GTGCGCGACG AACTGGGGCC GGTCGGCGTG CTGGTGAACA ATGCCAGCAC GTTCGAGCGT
GACGAATGGA ACGATGCGAC CCGCGCGGGG TGGGACGCGC ATCTGGAGCC CAACCTGCGC
GCGCCCTTCG TGCTGATGCA GGATTTCGCC CGCCACCTGC CCCAGGGCGC CGAAGGCATG
GTGCTGAACA TGCTGGACGA GCGCGTCTGG TCTCTGACGC CGCATTTCGT CAGCTACACC
GTGTCGAAAT CCGCGTTATG GACGTTGACG CGCAGCATGG CGCTGGCCCT GGCGCCGCGG
CGCATCCGGG TGAACGCCAT CGGCCCCGGC CCGGCGCTGC CCAGCCCGCG CCAGACGCAG
GCGCAGTTCG CGCGGCAATG CGCCTCGGTG CCGCTGGGCC ATGGGACGAA TCCCGAGGAG
GTCGCCCGCG CCGCCCTGTC GCTGCTGTGC CTGCCGTCGG TGACGGGGCA GATGCTGGCG
CTCGATGGCG GGCAGCACAT GCAATGGTCG CCGGCCCCGC CCGCCGGCCA GATCCTGGAA
GAATAG
 
Protein sequence
MWPIPAAIPR VAFVTGGAVR LGRAMALALA DAGFSVAIHY RSGPDEARRT VEEISARRQR 
ACMLAADLAD ESQVMSLLAR VRDELGPVGV LVNNASTFER DEWNDATRAG WDAHLEPNLR
APFVLMQDFA RHLPQGAEGM VLNMLDERVW SLTPHFVSYT VSKSALWTLT RSMALALAPR
RIRVNAIGPG PALPSPRQTQ AQFARQCASV PLGHGTNPEE VARAALSLLC LPSVTGQMLA
LDGGQHMQWS PAPPAGQILE E