Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2912 |
Symbol | |
ID | 6976346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3190352 |
End bp | 3191137 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643392421 |
Product | short chain dehydrogenase |
Protein accession | YP_002277258 |
Protein GI | 209545029 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.07408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCCGA TTCCCGCTGC GATTCCGCGC GTTGCCTTCG TCACCGGGGG CGCGGTTCGT CTGGGGCGGG CCATGGCCCT GGCGCTGGCC GATGCCGGGT TTTCGGTCGC CATCCATTAC CGCTCCGGCC CGGACGAGGC GCGCCGCACC GTGGAGGAGA TTTCGGCCCG GCGGCAGCGC GCCTGCATGC TGGCGGCCGA CCTGGCGGAC GAATCCCAGG TGATGTCGCT TCTGGCGCGG GTGCGCGACG AACTGGGGCC GGTCGGCGTG CTGGTGAACA ATGCCAGCAC GTTCGAGCGT GACGAATGGA ACGATGCGAC CCGCGCGGGG TGGGACGCGC ATCTGGAGCC CAACCTGCGC GCGCCCTTCG TGCTGATGCA GGATTTCGCC CGCCACCTGC CCCAGGGCGC CGAAGGCATG GTGCTGAACA TGCTGGACGA GCGCGTCTGG TCTCTGACGC CGCATTTCGT CAGCTACACC GTGTCGAAAT CCGCGTTATG GACGTTGACG CGCAGCATGG CGCTGGCCCT GGCGCCGCGG CGCATCCGGG TGAACGCCAT CGGCCCCGGC CCGGCGCTGC CCAGCCCGCG CCAGACGCAG GCGCAGTTCG CGCGGCAATG CGCCTCGGTG CCGCTGGGCC ATGGGACGAA TCCCGAGGAG GTCGCCCGCG CCGCCCTGTC GCTGCTGTGC CTGCCGTCGG TGACGGGGCA GATGCTGGCG CTCGATGGCG GGCAGCACAT GCAATGGTCG CCGGCCCCGC CCGCCGGCCA GATCCTGGAA GAATAG
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Protein sequence | MWPIPAAIPR VAFVTGGAVR LGRAMALALA DAGFSVAIHY RSGPDEARRT VEEISARRQR ACMLAADLAD ESQVMSLLAR VRDELGPVGV LVNNASTFER DEWNDATRAG WDAHLEPNLR APFVLMQDFA RHLPQGAEGM VLNMLDERVW SLTPHFVSYT VSKSALWTLT RSMALALAPR RIRVNAIGPG PALPSPRQTQ AQFARQCASV PLGHGTNPEE VARAALSLLC LPSVTGQMLA LDGGQHMQWS PAPPAGQILE E
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