Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2414 |
Symbol | |
ID | 6975844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 2677588 |
End bp | 2680362 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643391937 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002276779 |
Protein GI | 209544550 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases [COG3962] Acetolactate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGA TCCGCCTGAC CATGGCACAG GCGCTGGTCC GCGCCATGTG CGCGCAGAAG ACCGAGCTGG ACGGCCAGAT CGTGCCGTTC TTCGGCGGTG TCTGGGCCAT TTTCGGCCAC GGCAACGTCG CCGGCATGGG CGAGGCACTG CACGCCCAGC GCGACGACAT CACCACCTTC CGCGCCCATA ACGAACAGGG CATGGTCCAC GCCGCCACGG CCTATGCCAA GGCGCAGCGG CGGCGGCGGG CCATGGCCTG CACCACCTCG ATCGGCCCGG GCGCGCTGAA CATGGTCACG GGCGCCGCCG TGGCGCACGT GAACCGCCTG CCGGTGCTGC TGCTGCCCGG CGACGTGTTC GCCAACCGCG TGCCCGATCC CGTGCTGCAG CAGGTCGAGG ATTTCGGGGA CGGCACCATC ACCGCCAATG ACGCCTTCCG CCCGGTATCG CGCTATTTCG ATCGCATCAC CCGGCCGGAA CAGCTCATTC CCGCCTTCGC CCGCGCCATG GCCGTGCTGA CCGATCCCGC CGAATGCGGC CCGGCGACGC TCGCGCTGTG CCAGGACGTG CAGGCGGAAG CGTTCGACTA TCCCGAGCAT GTCTTCGCCG AGCGCATCCA CCGGCCCCGG CGCCCCGCCC CCGACGAACG GGAACTGCAC GACGCGGCCG GCATCATCCG CGCGGCGCGG CGGCCCTTCG TGGTGGTCGG CGGCGGCGTG CCGTATTCCG GGGCAGGGGA GCAGGTGGCC GCCTTCTGCG CCGCGCACGG CATTCCCGCC GGGGAAACCC AGGCGGGGAA ATCCGCGCTG CCGGCCATGC TGGCCATGAA CATGGGCGGG GTCGGCGTCA GCGGCACCAG CGCGGCCAAC ACCATGGCGG CGCGTGCCGA CGTCGTGATC GCCATCGGCA CGCGGCTGCA GGATTTCACG ACCGGGTCCT GGGGCCTGTT CCAGAACCCC GACATGCGGA TCGTGGGCCT GAACGTGCAG GCGTTCGACG CCATGAAGCA CGAGGCGCAG CCGCTGCTGG CCGACGCGCG CGTGGGGCTG GCGGCGCTGG ACGCGCACCT GGGGGACTGG CGCGCGGAAG GCGACTGGAC GGGCATGGCC GAACGCGCTC GCGCCGAATG GCTGGAAATC TCGGCGCGCT GCCTGGCGGC ATCTTCGGCC TCGGCCCCGC CATCGGGCGC CCTGCCGTCC GACGCGCAGG TGATCGGCGC CGTGCGCCGC GCCGGCACGC CTGCGGACGT CGTCGTCTGT GCGGCGGGGG GGGCTTCCGG CCGAACTGCA GAAGCACTGG CGGGCGGACA GGCCGGGCGG CTACCACATG GAGTACGGCT TTTCCTGCAT GGGGTACGAA CTGGCCGGCG CGCTCGGCGT CAAGATGGCC GATCCGTCGC GCGAGGTCAT CGTGATGGTG GGGGACGGCT CCTACCTGAT GCTGAATTCC GAAATCGCGA CCTCGGTGAT GCTGGGCTTC AGGCTGACCA TCGTCGTGCT GGACAATCAC GGCTATGGCT GCATCAACCG GCTGCAGCAG GCATGCGGCG GCGCGCCGTT CAACAATCTG TGGAAAAATT CTATGCATAT GCACGAATTT CCCGACATCG ACTTCGCGGC CCACGCGCGC AGCCTGGGCG CCGACGCCGT CAAGGTGTCC GGCCTGGCGG CGCTGGAGGA AGCGGTCCGC CAGGCCCGCG ACGCCGCCCG CACCACCGTC ATCGTCATCG ACACCGACCC CATGCCGACG ACGCAGGACG GCGGCGCGTG GTGGGACGTG GCGGTGCCCG AAATCTCGGC CCGCCCGGGC GTGAACCAGG CCCGCGCGGA ATACGAATGC AAGCGCAATT CCCAACGCAT CGGAAACTGA CCATGTCCGC AAAAATCGGC GCCAACCCCA TCATCTGGTC GAACGACGAC ATGCCGGAAC TGGGGGGCGA GACCCCGCTG GAAACCTGCC TGGCCGAGGC GCACAGCGCC GGGATGGAGG GCCTGGAACT GGGCAACAAG TTCCCCCGCA CGCCGGACGC CCTGCGCGCG GCGCTGGCCC CCCACGGCCT GGCCTGCATC TCCGGCTGGT ATTCCTGCGA ATTGCTGACC CGCAGCGCGG AAGACGAAAT CGCCGCCATG CAGGACCATC TGCAACTGCT GCGCGCCATG GGCTCACCGG TCATGATCTT CGCGGAAACG TCCAACACGG TGCATACGCA AATCGACGTG CCGCTCTCCG CCCGCCCGGT CCTGGACAGC CAGGACTGGC AGGGTTTCGC ACGGCGCCTG ACGATCGTGG GTGACGCGGT GGCCCGGGCG GGGCTGAAGC TGGTCTATCA CCACCATATG GGCACCGTGG TGCAGACGCC CGCCGACATC GACACCCTGA TGCGCCTGAC CGGGGAATCG GTGCACCTGC TGCTGGATAC CGGCCATGCC TGGTGGGGCG GGGCGGACCC GGCGGCGCTG GCCGCCCGCT ATCGCGACCG CATCGCCCAT GTCCACACCA AGGATGTGCG CCCCGCCATC CGTGCCCAGG CCGACGCGCA GGACTGGAGC TTCCTCCGGT CTGTGCTGAA CGGCGTGTTC ACGGTCCCGG GCGACGGTGA AATCGATTTT CCCGCCGTGT TCCGCAACCT TCCCGGCTAT GACGGCTGGG TGGTCATCGA GGCCGAACAG GACCCGGCCC GCGCCAATCC GCTGACCTAT GCGCGCATGG GCCGGAACTA CCTTGCCAGA ACACTGCACG ATGCGGGGCT GCTGTCATGC CGTCACGCCT CCTGA
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Protein sequence | MNTIRLTMAQ ALVRAMCAQK TELDGQIVPF FGGVWAIFGH GNVAGMGEAL HAQRDDITTF RAHNEQGMVH AATAYAKAQR RRRAMACTTS IGPGALNMVT GAAVAHVNRL PVLLLPGDVF ANRVPDPVLQ QVEDFGDGTI TANDAFRPVS RYFDRITRPE QLIPAFARAM AVLTDPAECG PATLALCQDV QAEAFDYPEH VFAERIHRPR RPAPDERELH DAAGIIRAAR RPFVVVGGGV PYSGAGEQVA AFCAAHGIPA GETQAGKSAL PAMLAMNMGG VGVSGTSAAN TMAARADVVI AIGTRLQDFT TGSWGLFQNP DMRIVGLNVQ AFDAMKHEAQ PLLADARVGL AALDAHLGDW RAEGDWTGMA ERARAEWLEI SARCLAASSA SAPPSGALPS DAQVIGAVRR AGTPADVVVC AAGGASGRTA EALAGGQAGR LPHGVRLFLH GVRTGRRARR QDGRSVARGH RDGGGRLLPD AEFRNRDLGD AGLQADHRRA GQSRLWLHQP AAAGMRRRAV QQSVEKFYAY ARISRHRLRG PRAQPGRRRR QGVRPGGAGG SGPPGPRRRP HHRHRHRHRP HADDAGRRRV VGRGGARNLG PPGREPGPRG IRMQAQFPTH RKLTMSAKIG ANPIIWSNDD MPELGGETPL ETCLAEAHSA GMEGLELGNK FPRTPDALRA ALAPHGLACI SGWYSCELLT RSAEDEIAAM QDHLQLLRAM GSPVMIFAET SNTVHTQIDV PLSARPVLDS QDWQGFARRL TIVGDAVARA GLKLVYHHHM GTVVQTPADI DTLMRLTGES VHLLLDTGHA WWGGADPAAL AARYRDRIAH VHTKDVRPAI RAQADAQDWS FLRSVLNGVF TVPGDGEIDF PAVFRNLPGY DGWVVIEAEQ DPARANPLTY ARMGRNYLAR TLHDAGLLSC RHAS
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