Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1790 |
Symbol | |
ID | 6975211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 1986787 |
End bp | 1987755 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643391316 |
Product | TrwC relaxase |
Protein accession | YP_002276167 |
Protein GI | 209543938 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.428161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.65409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACTT GCACGCCTTT GTCGGATGTC GAATATTATA TTGAGTCTAT CGATGAGGGG CTCGCGGCGC AAACTGCTTT GACGGGAGAG CGGGAACGTC CCGCACGAGG ACATCGCAAG CGGGGGGATT GGTCAGGGCG GGATCGGGCT GCCTATTATG TGGACAATGG CACAGGTGAA AAACCCGGCA TCTGGTGGAC GAATGTCCTG AAGGCTCCGG TACAGCCTCT TCCGTTTGTC TGTCAGAGTG CCGAGGTCAG TCCATCTGAT TTCAGGGCGT TGGCGAGGGG ATGCGATCCG CTGACGGGTC AGGCTCTGGT TCAGAGCAAA GGGCAACGTC GTGTTGGGTA TGATCTGCAA TTTGCAGCCC CCAAATCGGT ATCGGTTTTG TGGGCCATGG GAACAGACAT TCAGCGTGCC AGAATTGAAT CGGCCCAGGC GAAAGCCGTT TTTGCGGCAC TTGATTACGC CCTCAGAACA GGTCTGATCG TCACCCGTCG AGGTCACAAT GGCGGTCAAA GAGAAACGCC CGCTGAGTTA ATGGCCGGCA CATTTCTGCA CACCACCAGT CGTGCGGGGG ATCCCCAGAT CCATACGCAT GCCGTGTTGA TGAATGTGTG TCGCCGTAAG GATGGCTCAA CTGGCACAGT GGATAATCGG GAACTTCTTT TACATCAACA GGAAATGGGT GCCGTCTATC GTCTGGCATT GAGTGAGGCG CTGGAACGAG ACATTGGTCT GACAACACTC AAGGATGGTC GGAATTTCCG GGTGGCCGGT GTGGCGCCCA GTGTGGAAGA GCGCTTCTCA AAAAGGCGGG CGGCCATTGA ACAGGAAGCG CGTAAAAGGG GGATACAGAC AGCCCACCAT AGGGAAGCGG CCGAACATAT TTCCAGGAAT ACGCGCGCAG CCAAGTCAGA CCTCCCGTCA CGGGCCGTTT TGCGGGCACG GTGGGAACAG GAGTGTTGA
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Protein sequence | MFTCTPLSDV EYYIESIDEG LAAQTALTGE RERPARGHRK RGDWSGRDRA AYYVDNGTGE KPGIWWTNVL KAPVQPLPFV CQSAEVSPSD FRALARGCDP LTGQALVQSK GQRRVGYDLQ FAAPKSVSVL WAMGTDIQRA RIESAQAKAV FAALDYALRT GLIVTRRGHN GGQRETPAEL MAGTFLHTTS RAGDPQIHTH AVLMNVCRRK DGSTGTVDNR ELLLHQQEMG AVYRLALSEA LERDIGLTTL KDGRNFRVAG VAPSVEERFS KRRAAIEQEA RKRGIQTAHH REAAEHISRN TRAAKSDLPS RAVLRARWEQ EC
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