| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1339 |
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| Symbol | |
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| ID | 6974747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1496506 |
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| End bp | 1498650 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643390871 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002275736 |
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| Protein GI | 209543507 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.368228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTT TCCGTAATCT GTTGATCGCT TCGAGCACGT TCGTGGCGAT GGGAACCTGC
GTGGCGCAGG CTGACGAGCC CGCGAAGCAA GCTGCCCCGG CCAAGCGATC GAAGCCACAT
GTTGTCCAGG GCGGCGACCA GGCCGGCAAG TCGAAGCCCG CGACCACGTC ATCGAACGTC
CCGGCCCGGA CATCCAGCCC CGCCGTTTCC ACGCAGACCG CCGAACTGCC CGAACTGATC
AGTGTCAGTG CCGCGCGCCG GCCGACCTCG GTCGACGATA TCGGCACCAG CATGACGATC
GTGACCGAAC AGCAGATCCA GACCCAGCAG CGCCGGGGAC TGGCCGATAT CCTGGAGCGC
CAGCCGGGCC TGAACGTCGT GCAGACGGGT GGCCCCGGGG GGACGACATC CATTTTCATG
CGCGGCAACA ACGCGAACGA GGTCAAGGTC CGTCTGGACG GCATGGACGT CAATGACGGC
AGTTCCGCCC AGGGTATGTT CGACGCCGCC CAGTTCATGA CGGACGGCAT GGGACGGATC
GAGATCCTGC GCGGCCCGCA AAGCGGCCTG TATGGCGCGG ATGCCATGGC AGGCGTGATC
GATATCACCA CGGCGCAGGG GGAAGGCCGC TTCAAGCCCT TCGTCCGGAT CGAAGGCGGC
GGATACGGCA CCTTCAACCA GGTCTTCGGC GCGCGCGGCA GCAAGGGGCG CTTCCATTAC
AACGTTGAAT TTTCCCATTA CCGAATGGAC GGATTCAACA ACATCCCGTC TTATATCGAG
CGCGCCTACA ACGCCGACTG GCGGCAGCGC CACGAAGGCA ATCGCAACGA CAACCGCAGC
GCCAATATCC GCCTGGGGTA TGATGTTGCC CGCAATTTCG ACCTGGGCCT GACGACCCGC
CTGATACAGG GAAACAACCA CAGCTATTCC CTCTATGACC TGCAAAACGA GTATTTCGGA
TATTCCGGCG TGCGCGAACA AAACAACACG AACGAGGCGA TCGTGCGGGG TACGGCGCAT
CATGTCTCGT TCAACGGGCT GTTCGACCAG GTGATCGGCC TGGGATACAT GACCAACCGC
AATCGCTGGA CGGAGACGGG AACGAGCTAT GGCAGCCCGA TCAACCCCGA TCCCGATTAC
TACCGTTCCG ACCGGTTGAA GATCGACTGG CACGGCACGT TCAATTTCCG GCAGTACGGT
CAGTTCATGG TCGGCGCCGA ACATTTCCAC GAGACATTCA ATACCAGCCA GGCCGGCGGC
ATTTCTGGTC CCGGATATGA CACGTCCGCC GGCATGGACA CGACCGCCGG ATACGGGCAG
TACCAGGGAA ACTGGAACCA CATCCTGTAT GGCGCCGCCA ATATCCGGTA TGATGCGAAT
TCACGATACG GCAACCATGT GACCTGGCGC GTGGCGCCCG CCATCCATGT TCCGGGCACC
GGCACCATCA TCAAGGCCAG CGCCGGTTCC GGATTTCATG GACCGTCCCT GTACCAGCTC
TTCGCCAACC AGGGCGGGTA CGGGTATTCC GAAAAGGGCA ATCCGAACCT GAAGGCCGAA
CAACTGATCG GCTATGACGC CGGGGTCGAG CAGAAGCTGC TGCATGATAG CCTGAATTTC
GGCGCGACCT GGTATGACAA CCGGGTCCGG AACCTGATCC AGTCGACCCT GTCCATTGAT
TCCTCCTATA ACTACAACTA TTCGTACGCC AACGTGGACC GGGCGCGCAT GTACGGCGTG
GAGGCCTTCC TGAACTGGAA GGCACGCCGC GACCTGCAGT TCAACCTGAG CTACACCTGG
ACCCATGCGC GCAACGAGAC GGACGATACG GAACTGCAGC GCCGTCCCCA GCATAAATTC
AACTTCAACA CGACATGGAC GCCCATCCAG GACCTGACCT TTTCGGGAAA CATCCTGTAC
ACCAGCGCCT GGCGCGACCT GCCGGTCATC GGCAGCGAAT CATGCAGCGT ATGCGCCAAG
GGGCATGGCT ATTTTACGAT CGATATCGCC GCCAATTACA AGATCAACAG ATATGTCTCG
GTCTATGCGC GCGCGGACAA CCTGCTGAAC AGGCAATATG AGGACCCGAT CGGCTACCTG
CAGCCCGGGC GCGCGGGCTA TGGCGGCTTT ACGCTGAATT ACTGA
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| Protein sequence | MSVFRNLLIA SSTFVAMGTC VAQADEPAKQ AAPAKRSKPH VVQGGDQAGK SKPATTSSNV
PARTSSPAVS TQTAELPELI SVSAARRPTS VDDIGTSMTI VTEQQIQTQQ RRGLADILER
QPGLNVVQTG GPGGTTSIFM RGNNANEVKV RLDGMDVNDG SSAQGMFDAA QFMTDGMGRI
EILRGPQSGL YGADAMAGVI DITTAQGEGR FKPFVRIEGG GYGTFNQVFG ARGSKGRFHY
NVEFSHYRMD GFNNIPSYIE RAYNADWRQR HEGNRNDNRS ANIRLGYDVA RNFDLGLTTR
LIQGNNHSYS LYDLQNEYFG YSGVREQNNT NEAIVRGTAH HVSFNGLFDQ VIGLGYMTNR
NRWTETGTSY GSPINPDPDY YRSDRLKIDW HGTFNFRQYG QFMVGAEHFH ETFNTSQAGG
ISGPGYDTSA GMDTTAGYGQ YQGNWNHILY GAANIRYDAN SRYGNHVTWR VAPAIHVPGT
GTIIKASAGS GFHGPSLYQL FANQGGYGYS EKGNPNLKAE QLIGYDAGVE QKLLHDSLNF
GATWYDNRVR NLIQSTLSID SSYNYNYSYA NVDRARMYGV EAFLNWKARR DLQFNLSYTW
THARNETDDT ELQRRPQHKF NFNTTWTPIQ DLTFSGNILY TSAWRDLPVI GSESCSVCAK
GHGYFTIDIA ANYKINRYVS VYARADNLLN RQYEDPIGYL QPGRAGYGGF TLNY
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