Gene Gdia_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1287 
Symbol 
ID6974692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1432229 
End bp1433515 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content68% 
IMG OID643390816 
Productprotein of unknown function DUF21 
Protein accessionYP_002275684 
Protein GI209543455 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGC CGCTTGTCGT CATTTTTCTC CTCGTTCTCA TCAATGGCAT CTTCGCCATG 
GGGGAACTGG CCCTGATCTC GGCGCGCCGC ACGCGCCTGA TGATCATGCA CCGCAGCGGG
GTGAAGGGCG CCGAGCGGGC CCTGCGCCTG GCCGAGGACC CGCAGAGCTT CCTGCCCACG
GTGCAGGTCG GCATCACCCT GGTCTCGATC CTGGAAGGTA CGTTCGGCGG CACGCAGATC
GAAGGGTACC TGACGCCCTG GCTGGCGCGG TTTCCGGCCT TGCGTCCGTT CGCCGCCGAA
CTGTCGATGA CGGTCGTGGT GGTGGCGATC ACCTCGCTGA TGCTGGTGCT GGGCGAACTG
GTGCCCAAGC AGCTTGCGCT GCGCCATCCC GAAATCGTCG CGGCGCGGCT GTCGCTGCCG
TTGGAAGGCC TGGCCCGCGT CACGCGCCCG GCCGTCTGGC TGCTGGGGCG GTCCTCGAAC
CTGGTGCTGC GCCTGATGGG CGTGGGCGCC ATGACCCGCG AAGCCCTGAC CGAGGAAGAA
CTGAAGGCCT ATATCGCCGA AGGCGCGCAG TCCGGCGTGC TGGAGCAGGA GGAGCGCGAC
ATGATCGAGC GCCTGCTGCG CCTGGCGGAC CGGCCGGTCC GTGCCATCAT GACGCCGCGC
AACGAGCTGT TCTGGATCGA ACGCCACGCC AGCCGTGAGG AACTGCGCCG TACCCTGCGC
AACACCGTCT ATACCCGCAT CGTGGTCTGC GACGGCGGGG TCGACAATCC GGTGGGCGTC
ATCCTGGCGA AGGACATGCT GGACCGCCTG CTGGACGGGC GGCCGGTCAC GATCGAATCG
GGGCTGCGCA AGCCCGTGGT GGTCCCCGAC ACGATCTCGG CCTTCGACAT GGTCGAACGG
ATGCGCACCG TGCCCCTGGG CATCGCGCTG GTGCTGGACG AATACGGGTC GTTCGAAGGG
ATCGTGACCG CCTCGGACCT GTTCGAGGCC ATCGTGGGCG AACACCACGA ACCGGGCAGC
ACCCCCAAGA AGCGCATGGC GCAGGACGAC GTGCTGATCC TGGACGGCTT CATGCCCGCC
GACGAGGTCA AGGACCGCCT GGGCCTGTCC GACCTGCCGG ACGAAGGCAG CTACCACACG
CTGGGCGGCC TGATCCTGGC GCTGCTGCGC CGCGTGCCGG CGACGGGGGA CAAGGTCGTG
TTTTCCGGCT GGCTGTTCGA GGTCCTGGAG ACCGACCAGC GGCGGGTTGT GAAGGTCCGG
GCCAGCCGTC AGGCGCTGGC GGACTGA
 
Protein sequence
MIAPLVVIFL LVLINGIFAM GELALISARR TRLMIMHRSG VKGAERALRL AEDPQSFLPT 
VQVGITLVSI LEGTFGGTQI EGYLTPWLAR FPALRPFAAE LSMTVVVVAI TSLMLVLGEL
VPKQLALRHP EIVAARLSLP LEGLARVTRP AVWLLGRSSN LVLRLMGVGA MTREALTEEE
LKAYIAEGAQ SGVLEQEERD MIERLLRLAD RPVRAIMTPR NELFWIERHA SREELRRTLR
NTVYTRIVVC DGGVDNPVGV ILAKDMLDRL LDGRPVTIES GLRKPVVVPD TISAFDMVER
MRTVPLGIAL VLDEYGSFEG IVTASDLFEA IVGEHHEPGS TPKKRMAQDD VLILDGFMPA
DEVKDRLGLS DLPDEGSYHT LGGLILALLR RVPATGDKVV FSGWLFEVLE TDQRRVVKVR
ASRQALAD