| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0961 |
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| Symbol | |
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| ID | 6974358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1085447 |
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| End bp | 1086853 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643390484 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_002275360 |
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| Protein GI | 209543131 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA ACGATGTCGG TGTTATCGAT ACCTTTTTGA ACACCTTCAC CACCACCATC
GATACGGGGT TCGGTCTGGT GAAGGGGAAT GTGATCTCGC TGGCAGGTAC GCTGTCGGTG
CTGGACATCG CGCTGGCCGG TCTGTTCTGG GCCTGGGCTG CGGATGAGGA CATCATCCAG
CGTCTGGTGA AGAAGACGCT CTATATCGGC TTCTTCGCCT GGGTCATCAA CGATTTCGAT
GCGCTCTCGA AGATTGTTTT TGACAGTTTC GCGGCCCTCG GTCTGAAGGT CGGAGGCGGC
AGTCTGGCTC TCGGTGACTT CCTGCGGCCC GGCCGTCTGG CCTCCACGGG GTTCACGGCG
GCGCAGCCGC TTCTGGACTC TGTTCACAAT CTCCTCGGTC CTGTCGCCTT CTTTACGAAT
TTCATCCAGA TCTTCGTGCT GTGTCTGTCC TGGCTGATCG TGCTGGCAGC CTTTTTCATC
CTCGCCGTGC AGCTTTTCGT AGCGCTGATT GAGTTCAAGC TGACCACGCT GGCGGGTTTC
ATCCTGATCC CCTTCGCCCT GTTCAATCGT ACGGCTTTCC TCGCCGAGAA GGTGCTGGGC
AATGTCGTCT CCTCGGGTGT GAAGATCATG GTGCTGGCGG TCATTTCCGC CATCGCATCC
GTTCTGTTCG CCCAGTTTAC GACGTCCTAT GGCAGCGACG TGCCGACCAT CGGGCAGTCC
GTCTCGGTGG TGCTGGCGTC TCTGTCGATC GTCGGGCTCG CCATTTTTGG CGGCAGCATC
GCCAACGGGC TGATCTCCGG CGCACCGCAG CTTGGCGCGG GAGCGGCTGT TGGCACCGGC
ATGGCGGTGG GCGCCATGGG CGCTGCTGCT GCGGCCGGTG TCGGCGCTGT CGCCTCTGGC
GGTGCCGCTG CGCTGGGCGC TACAGCCGCC GCCGCGCGGG GAGGGGCCGC GATCGCGGGT
GCGGCCAACA CGGCTTATTC CATGGGAGCC ATGAATGCTG CCGGGGGCAG TGCCGGTGCC
CGTATGGCGG CTGGTCTGGG CGGTGTCGCC CGGGCGCCGG GCAGTGCTGC CGCAAATGCC
GTGAAGAGTA AAATGTCGTC GGCGGCGACC GCCATGAAGC AGAGCTACGG CGAGGGAGCG
CGAGGCACCT TCACCGCGAC GGGCGGACGT TTCACGGGTG GGTCGTCGTC CGATGCGAAC
GGCGGGCAGG CCGGTGGTCC GTCAGGTAAT GGCGGCGGAC CAACGGGTGG TGGTGAAGGC
GGCAGTCCCG ACGGTCAGTC ACCCCGCTGG GCGCAAAAGA TGAAGCGCCG CAGTGCCGCC
GCCCATGCTG CTGAGGCCGC GCATGTCATT CGCTCCGCCG ACGGCGGGGG CGGATCTTCC
TCCATCGATC TGTCGGAAAA GGAATGA
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| Protein sequence | MAMNDVGVID TFLNTFTTTI DTGFGLVKGN VISLAGTLSV LDIALAGLFW AWAADEDIIQ
RLVKKTLYIG FFAWVINDFD ALSKIVFDSF AALGLKVGGG SLALGDFLRP GRLASTGFTA
AQPLLDSVHN LLGPVAFFTN FIQIFVLCLS WLIVLAAFFI LAVQLFVALI EFKLTTLAGF
ILIPFALFNR TAFLAEKVLG NVVSSGVKIM VLAVISAIAS VLFAQFTTSY GSDVPTIGQS
VSVVLASLSI VGLAIFGGSI ANGLISGAPQ LGAGAAVGTG MAVGAMGAAA AAGVGAVASG
GAAALGATAA AARGGAAIAG AANTAYSMGA MNAAGGSAGA RMAAGLGGVA RAPGSAAANA
VKSKMSSAAT AMKQSYGEGA RGTFTATGGR FTGGSSSDAN GGQAGGPSGN GGGPTGGGEG
GSPDGQSPRW AQKMKRRSAA AHAAEAAHVI RSADGGGGSS SIDLSEKE
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