Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0406 |
Symbol | |
ID | 6973800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 443948 |
End bp | 444652 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643389938 |
Product | transcriptional activator, TenA family |
Protein accession | YP_002274817 |
Protein GI | 209542588 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.23459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATGGA CGGCGGAACG GGACTGGCCC CGCCTGGCAA GCGGCCTGGC CGGGCGGCTG CGGCGGGATT GCGGCGCCGA ATGGGACGGC TTCATCCATC ATCCCTTCGT GCGCGGCCTG GCGGACGGCA GCCTGCCCGA GGCCGAGTTC AGGCGGTTCC TGATCCAGGA CTACCTGTAC CTGATCCAGT ATGCCCGGGC CTACGCCCTG GCGATCTACA AGGCCGACAG GCTGGAGGAC ATGCGCTCGG CCTCCGCCAT CGTGTCGGGC CTGCTGGATA CCGAACTGGC GCTGCACGTG TCCTATTGCA CCGGCTGGGG CCTGTGCATC GAGGATTTGC AGAGCCAGCC GGAATCGCTG GAACTGCTGG CCTATACGCG CTTCATCCTG GACCGGGGGC AGGCGGGCGA CCTTCTGGAC CTGATGGTGA CGCTGGCGCC CTGCCTGATC GGCTATGGCG AAATCGGCGT CCGGCTGGTG GCCGATCCGC ACACCAGGCG GGACGGCAAT CCCTACTGGC CATGGATCGC GCTTTACGGC GGTGAGAAAT TCATCGGCCT GGTCGACGCC GGTATCGACA CGCTGGAGGC ATTGAGCCTG CGCTACGGCG CCGATGCGCG TTATCCGATG CTGCTGTCGG AATTCCGGAC CGCCGTGAAG CTGGAGGCCG CGTTCTGGCA CGCTGGCCGT TCGGGCGCGC TCTGA
|
Protein sequence | MEWTAERDWP RLASGLAGRL RRDCGAEWDG FIHHPFVRGL ADGSLPEAEF RRFLIQDYLY LIQYARAYAL AIYKADRLED MRSASAIVSG LLDTELALHV SYCTGWGLCI EDLQSQPESL ELLAYTRFIL DRGQAGDLLD LMVTLAPCLI GYGEIGVRLV ADPHTRRDGN PYWPWIALYG GEKFIGLVDA GIDTLEALSL RYGADARYPM LLSEFRTAVK LEAAFWHAGR SGAL
|
| |