Gene Gdia_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0345 
Symbol 
ID6973739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp387917 
End bp388246 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content54% 
IMG OID643389877 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002274756 
Protein GI209542527 
COG category[S] Function unknown 
COG ID[COG3512] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0897014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0328291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG AGGACATCCG GTTCATGTGG CTTCTCGTAT TTTTCGACCT TCCGGTTCGC 
ACCAAAGAGC AGCGACGACG CGCCAGTCGC TTTCGCCATT TCCTCAAGGA TGACGGCTTC
TTGATGTTGC AATTTTCGGT TTACGCACGC ATCTGCCGAG GACAGGACGC TGTGGAAAAG
CATGTTCGGC GGGTGCGGTC GAATCTTCCA AAGGAAGGTA GCGTTCGGAC ACTACAAATC
ACGGACAGGC AATACGGACG GATGGAATTG ATGCTGGGCC TTGCGCCAAA AACCGAGCGA
ATCGGACCTT CTCAGATGGT GCTGTTGTGA
 
Protein sequence
MKAEDIRFMW LLVFFDLPVR TKEQRRRASR FRHFLKDDGF LMLQFSVYAR ICRGQDAVEK 
HVRRVRSNLP KEGSVRTLQI TDRQYGRMEL MLGLAPKTER IGPSQMVLL