Gene Gdia_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0289 
Symbol 
ID6973681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp318936 
End bp319451 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content65% 
IMG OID643389820 
Productpreprotein translocase subunit SecB 
Protein accessionYP_002274701 
Protein GI209542472 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.346906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.945579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA CGACCCAGCC CCCCGCCGAT GACGCCCAGA ACGTTCCGCC GGCGATGCCG 
CTGACCATCA ATGTTCAGTA TATCAAGGAT CTGTCGTTCG AAGTTCCCGC CGGCGCTGAA
ATCTTCGCGA CCCTGCGCGC GAATCCCCAG ATCGCGGTGA ACATCGACGT GCAGGCCAAT
CGCCTGCAGG CCGAGCATCC GGTGTTCGAA GTCGTTCTGG CGATCAAGAC CGAAGCCCTG
GAAGCGCCGG AAAAGGAAGG CGCCGCCCCC GGCCGCCCGG TGTTCATCGC CGAACTGGCC
TATGGCGCCG TCGTGACCCT GACCAACGCA CCGGACGAAC TGGTCGAGCC GATCCTGCTG
GTCGAAGTGC CGCGCCTGAT CTTCCCGTAC GTGCGCAACA TCATCAGCGA AGTGACGCGT
GACGGCGGGT TCCCGCCCGT GGTGCTGCAG CCGATCGACT TCGTGGCGCT GTGGCAGGCC
AAGCGCAGCT TCCCCCAGAC GGCCGGCAAC GCCTGA
 
Protein sequence
MSDTTQPPAD DAQNVPPAMP LTINVQYIKD LSFEVPAGAE IFATLRANPQ IAVNIDVQAN 
RLQAEHPVFE VVLAIKTEAL EAPEKEGAAP GRPVFIAELA YGAVVTLTNA PDELVEPILL
VEVPRLIFPY VRNIISEVTR DGGFPPVVLQ PIDFVALWQA KRSFPQTAGN A