Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_4481 |
Symbol | |
ID | 8553863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 4800767 |
End bp | 4804054 |
Gene Length | 3288 bp |
Protein Length | 1095 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | drug exporter of the RND superfamily-like protein |
Protein accession | YP_003275507 |
Protein GI | 262204299 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.150601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTCGGAG CCATCGGCAC ATTCGTCTAC CGAATGCGCT TCGCCGTCAT CGCGGTGATG ATCGCCCTGA TGGCCGGCCT CGGGCTCTAC GGGTTGGACC TCGGTAAACA CCTCAGTCAG AGCGGCTGGT TCGATCCCAC GTCCGAGTCG GTCCGCGGCT CGCAGTACGC CGACGCCGCA CTCGGACGCG ATCACCGCTC CGACATCATC CTGCTGGTCA CCCCGCCCGC GGGCACCACC GTCGACGACC CGGCCTTCGG CGCGAAGGTG GAGACGTTCG TCGACGACCT CATCGCCGCG CACCCCGACA TCGTCAACCG GCAGGACCCG GGCGTCATCG ACCCGTTCTT CAAGCAGTCG GTGCAGTCCG CGGTCCAGGA ACGCACCTTC ACCGCGGACA AGAAACACGC GTTCATCAGC ATCGGCGTCG CCGGCAACGA CGACACCACG GTCCTCAACA ACTACAAGAC CATCGAACCG TTCTTCCACG ACATCGACGA CAGATTCGGG CTCGAGGGCA CCACCTTCGA ACTCGCCGGT CTGCAACCGG TGGCCGGCAG TATGGCCGAC GGCATGGACA AGGACATCCA CCGCGCCGAG GTCATCGCGC TGCCGATCGT CGCCATCATG CTGTTCTTCA TCTTCGGGGG CGTGGTCGCG GCATGTCTGC CGGTCCTGAT CGGCGGTCTC ACGATCGCCG GCTCGCTGGG CATCATGAAG ATTTTGGCGC TGACCACCGA GCTGAACATC TTCGCGCAGT CCGTGGTCAC CCTGATCGGT CTGGGTATCG CGATCGACTA CGGCCTGTTC ATCGTGTCCC GGTTCCGGGA GGAACTCGGC GAGGGCTATT CCACCAAGGC CGCGGTCCGA AGAACCGTGA TGACCGCGGG TCAGACCGTG GTGTTCTCGG CGACGATCAT CGTCGCCGCC CTGGCCTGTC TGCTGATCAT GCCGCAGGGC TTCCTCAAAT CGGTCGCCTA CGGCGCCATC GCGTCGGTGA CGCTGGCCGC GATCCTGTCC ATCACGGTGC TGCCGGCGAT CCTCGGCATC CTCGGTCCGC GGATCGACGC GCTGTCCATC CACACCCTGA TGTCGTGGAC CGTGATCCCG CTGGTGCGCA AGACCCTCGG AGCGCAGCGG GCCGACGCCC TCGACGCCCG CTTCACCGGC CGGATCAAGA GTCGCCAGGA GATCGAGAAC GGCTTCTGGG GCAAGCTGTC GGGCTGGGTG ATGAAGCACC CGGTGGCCAC CGCCGTTCCC ACCGTCCTGC TGTTGCTGGT GCTGATCATC CCGTTCGGCG GCATCCAGTT CGGCGGCATC AGCGAGAAGT ATCTGCCGCC GGACAACCCG AACCGGGTGG CCCAGGAGAA CTTCGATAAG TACTTCCCGA CCGAGCGCAC CGAAGAGATC AAGCTCGTCG TCGTCTACGA CCCCAACACC CCCGATTACG ATTACAAGCT GCAGGCGATC GCCGACCAGG CCAACAAGAT CCCCGGCTTC ACCAAACCGT TCTCCACCTC GCCCAACGAC GGCGCGCAGT CGGGGCAGTA TCCCAACTCG GGTGCGTGGA TCTTCCAGAT GTCGTCGGGT CTGCAGGACC GCAACACCGC CGCCGAGGCC ATCAAGGATC TGCGGGCGAT CAACACCGGC GGCCTGCAGA TGTACGTCGC GGGTACGCCC GCGCTGACGC AGGATTCCAT CGACGCCCTG ATGAGCCGGT TGCCCCTGAT GGCGGTGCTG CTGGTGCTCG TCACCGGGTT CCTGATGTTC CTGGCGTTCG GTTCCATCGT GTTGCCGATC AAGGCGGCGT TGATGTCGGC GCTCGGCCTG GGCGCCACGC TGGGCATCCT GACCTGGATC TTCGTCGACG GCCACGGCGC CGAGCTGGCC AACTTCACGC CCGGCCCGCT GTTCGCGGCC GTGCTGGTGC TCATCATCGC GATCGTCTTC GGCCTGTCCA CCGACTACGA GATATTCCTG TTGTCCCGCA TGGTCGAGGC GCGGCAGAAG GGCGCGAGTA CCACCGAGGC GATCCGGGTG GGAACCGCAC ACACCGGCCG GATCATCACC GCGGCCGCGG CCATCCTGGT GGTCGTCACG GGTGCGTTCG GCATGTCCGA GATCGTGATG ATGAAGTACA TCGCGTACGG CATGATCGCC GCGCTGATCC TCGACGCGAC GGTCATCCGC ATGCTGCTGG TGCCGTCGGT GATGAAGCTG CTCGGCGACG ACTGCTGGTG GGCACCACGC TGGATGCGGG TGATGCAGCA GAAGATCGGT CTCGGTGAGA CGGTGCTCGA CGACGAGCCC GACGAGCTGC GCGACCGCTC CGCGGCGGCG AAGACGATGA GCGCGGGCAC GCTGGTCGCG GAGGCACCGA CGTCGGTGAT GGCCCGCCCA CGGGTGGCCC GTCCGGCGTC GATGGGACCA CCGCCGGAGC GCACAGCCCC CGCCCGCAGG GCCGCCGATC GTGCCCGGAC TCCCGAACCG ACCACGGTGG CCACCGAGCG TCCCACGCGC ACCCGCCCGC CCGCCGAGAC CGTGCCGCCC GCGGCCCGCC CTGCACGGGG CGCCCGGGTC GGGCCGTCGG CTCCGCCGTC GGGTCCGCAG CCCGTGGGTG CCGGCGCGAC GTCGGCGCCG GGTGGCCCGC CGGTCACCGG TGACCGGCCC ACCCCGTTCC GTCGGCCCGC GGCTCGTCCG CGCAGCGAGG GACCCGACAC CGGCGGGTGG CGACTCGGAG ACGGCGGAAT CCGTCTGGCA GAACCGAATT CGGGTCGACG CCCGACCGAC GGGGTACGCA CCTCCCTGGC TCCGACGACT CCGCCGCCAA CGGGTCGTCC GGCGACCGGC CCCGGCCCCG GCGGGCCGTC CCGACCGGGC GCGCCCCAAT CTCGTCCGTC CCAGCCGCGT TCACCCCAGT CCGGTGCACC GCAACCGGAT TCGTCGCACC AGGGGTCGTC CCAGCCGGGG TCGTCCCAGC CGGGGTCACC CCTGCGGCGT CGGCCCGAGC TGGAGAACAC CGGCGGGCGT CCGCTCGCGG CGTCGCTGTC CCCCGAGCGT TCGGGTCCAT CCGCCGACCG TCCCCGCGGC TCCGGCGACC GGATGGACCG GGGCCTGAGT CCCGACGCGG TGCCGTCAGC CGACGCCACG CGCACCCGGG ACTCCGATGC CGCCGAGCCC GGGCAGACGG GTTCGCGACG CTCCCGCACC GACCGTCACG CACGTTCCGA CGACGGCGGG CAGATCAGCG TGCAGGACCT GTTGCGCCGC AGCCGATCCG ACAGCTGA
|
Protein sequence | MFGAIGTFVY RMRFAVIAVM IALMAGLGLY GLDLGKHLSQ SGWFDPTSES VRGSQYADAA LGRDHRSDII LLVTPPAGTT VDDPAFGAKV ETFVDDLIAA HPDIVNRQDP GVIDPFFKQS VQSAVQERTF TADKKHAFIS IGVAGNDDTT VLNNYKTIEP FFHDIDDRFG LEGTTFELAG LQPVAGSMAD GMDKDIHRAE VIALPIVAIM LFFIFGGVVA ACLPVLIGGL TIAGSLGIMK ILALTTELNI FAQSVVTLIG LGIAIDYGLF IVSRFREELG EGYSTKAAVR RTVMTAGQTV VFSATIIVAA LACLLIMPQG FLKSVAYGAI ASVTLAAILS ITVLPAILGI LGPRIDALSI HTLMSWTVIP LVRKTLGAQR ADALDARFTG RIKSRQEIEN GFWGKLSGWV MKHPVATAVP TVLLLLVLII PFGGIQFGGI SEKYLPPDNP NRVAQENFDK YFPTERTEEI KLVVVYDPNT PDYDYKLQAI ADQANKIPGF TKPFSTSPND GAQSGQYPNS GAWIFQMSSG LQDRNTAAEA IKDLRAINTG GLQMYVAGTP ALTQDSIDAL MSRLPLMAVL LVLVTGFLMF LAFGSIVLPI KAALMSALGL GATLGILTWI FVDGHGAELA NFTPGPLFAA VLVLIIAIVF GLSTDYEIFL LSRMVEARQK GASTTEAIRV GTAHTGRIIT AAAAILVVVT GAFGMSEIVM MKYIAYGMIA ALILDATVIR MLLVPSVMKL LGDDCWWAPR WMRVMQQKIG LGETVLDDEP DELRDRSAAA KTMSAGTLVA EAPTSVMARP RVARPASMGP PPERTAPARR AADRARTPEP TTVATERPTR TRPPAETVPP AARPARGARV GPSAPPSGPQ PVGAGATSAP GGPPVTGDRP TPFRRPAARP RSEGPDTGGW RLGDGGIRLA EPNSGRRPTD GVRTSLAPTT PPPTGRPATG PGPGGPSRPG APQSRPSQPR SPQSGAPQPD SSHQGSSQPG SSQPGSPLRR RPELENTGGR PLAASLSPER SGPSADRPRG SGDRMDRGLS PDAVPSADAT RTRDSDAAEP GQTGSRRSRT DRHARSDDGG QISVQDLLRR SRSDS
|
| |