Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_2394 |
Symbol | |
ID | 8551757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | - |
Start bp | 2550698 |
End bp | 2551822 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | lycopene cyclase family protein |
Protein accession | YP_003273529 |
Protein GI | 262202321 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.990938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGATG TGATCGTGGT CGGGGCCGGC CCGGCCGGCC GTGCCCTGAC CCACCGGTTG CTCGCGCGGG ACGTCACCGT CACGCTCGTC GACCCGGCCC CCGACCGGCC GTGGCGCTCG ACATACGCCT GCTGGGCCGA CGAAATACCC GACTGGCTGG ACACCGACCG CACCATCGCC GCGTCGGTGT CCACGGTGGC TGTCTGGGGC CGCCGCCACC ACACGGTGAC ACGGCCGTAC TCGGTATTCG ATACCGCCGC GCTACAACGG TGTCTGTCCG TCGACGACGC ATTCGTGGTC GCTGCGCGCG CGGGATCGAT CACCCCGACG ACGATCCGGC TCGACGACGG CACGTCGATG ACCGCCGCTG CGGTCATCGA CGCACGCGGC AGCGTCGGGG CCGGTCCACG TCAGACCGCG TGGGGTGTCG TCGTGCCGCG CTCCGCCGCC CGGCCCGCTC TCGGGGAGCA CGAGGCCGTC CTGATGGACT GGCGCGACCA CCATCAGGTC GGCGGTGACG AACTCGGCGC CACGCCGTCG TTCCTGTACG CCGTACCGCT CGACGCCGAC CGTGTCCTTC TCGAAGAGAC CTGTCTCGCA GGCGATCCCG CCATCGAAGT GGCCGCCCTG CGGGAGCGGC TGGGTCGCCG GCTCGCCGCG ATCGGTGTCG ATGCGGCGGC AGTCACCGGC ACCGAGGCGG TGTCGTTCCG GCTGACCGGC GTTTTGGGTG CCCCCTGGCG ACATGCTCCC CCACTGTTCG GTGCACGCGC CGGGATCATG CATCCGGCCA CCGGCTACAG CGTCGCCGCC GCGCTGGCCG CCGCCGACCC GCTGGCGAGG GAACTAGCGG CCGGCGGCGA CCCGAATCGA CAGTTGTGGC CAACCCGGGC CCGCATCGTT CATCGCCTTC GGCAGGTCGG GCTGCGCGCA CTGCTCGACT TCGACGCGCC GGCCACCGTC GACTTCTTCG ACACCTTCTT CGACCTGCCC ACCCACCGTC AGCGCACCTA CCTGTCCGAC CGCACCGACG CGGCCGCCCT GAGCGCGACC ATGGCCGCAT TGTTCGCCGC ATGCGACAAC CGGACCCGGC GGCGGCTGGC GCGCGCGGTG CTCACCCCGC GCTAG
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Protein sequence | MPDVIVVGAG PAGRALTHRL LARDVTVTLV DPAPDRPWRS TYACWADEIP DWLDTDRTIA ASVSTVAVWG RRHHTVTRPY SVFDTAALQR CLSVDDAFVV AARAGSITPT TIRLDDGTSM TAAAVIDARG SVGAGPRQTA WGVVVPRSAA RPALGEHEAV LMDWRDHHQV GGDELGATPS FLYAVPLDAD RVLLEETCLA GDPAIEVAAL RERLGRRLAA IGVDAAAVTG TEAVSFRLTG VLGAPWRHAP PLFGARAGIM HPATGYSVAA ALAAADPLAR ELAAGGDPNR QLWPTRARIV HRLRQVGLRA LLDFDAPATV DFFDTFFDLP THRQRTYLSD RTDAAALSAT MAALFAACDN RTRRRLARAV LTPR
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