| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2030 |
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| Symbol | |
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| ID | 8551387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gordonia bronchialis DSM 43247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013441 |
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| Strand | - |
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| Start bp | 2155315 |
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| End bp | 2157078 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003273175 |
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| Protein GI | 262201967 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.31853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGTGG CCCAGGACGA GCCAGTGGCC GAACCCGGAG CCGAGGTGCG AACCGACGAG
CCCGGGATCG AGGGGGTGGC CGAACCAGAG GCCGAAGCAC CCACCGACGA GACCGGTCAT
CCCGAGTTCG CCGACGACAC ACCCGCCACC GCGGCTCCGC CACCCCCGCC CGGGGCCGGT
CAGCTCGACC CCGACAACAC GCACTGGTGG CGGTCGGCGG TCTTCTATCA GATCTATCCG
CGCTCGTTCT CTGATCTCGA CGGCGACGGT GTCGGCGATC TCGCCGGGAT CATCGACAAA
CTCGGTTACC TCGAACTGCT CGGTGTGGAC GCCCTCTGGC TCAGTCCCAT CATGCGGTCC
CCGATGGCCG ATCACGGATA CGACGTCGCC GATCCCCGCG ACATCGACCC GCTCTTCGGC
GACGTCGAGA CCTTCGACGC GCTGATCGCC GAGGCCCATG ACCGCGACAT CCGCGTCACC
ATGGACCTGG TGCCCAATCA CACCAGCGAT CAGCATCCGT GGTTCGTGGC GGCCCTCGCC
GGCGAACCCG ACGGTCCCGA GCGGGCCCGC TATATCTTCC GGGACGGTCT CGGCGACAAC
GGTGACGACC CACCCAACAA CTGGCACAGC GTCTTCGGCG GCCCGGCCTG GACCAGGGTC
ACCGAGGCCG ACGGGTCTCC CGGCCAGTGG TACCTGCACA TCTTCGCCGC CGAGCAGCCG
GATCTGAATT GGGAGAATCC CGAGGTCTTC GCCGACCTCG AGACCACCCT GCGGTTCTGG
CTGGACCGTG GCGTGGACGG ATTCCGGATC GACGTCGCGC ATGGAATGGC CAAACCCGCC
GACCTGCCCG ACATGGATCT GACGAACACG ACGCTGCTGC AGAACGACGA CGACGATCCG
CGGTTCAACA ACTATGCGGT GCACGAGATC CACCGACGGA TCCGCAAGGT CATCGACGAG
TATCCGGGCG CCGCCAACGT CGGCGAGATC TGGGTCGATG ACAACGAACG CTTCGCCGAG
TACCTCCGTC CGGATGAACT GCACCTGGGC TTCAACTTCC GGCTCGCCAA AGCCGATTTC
GACCCGGCCG CCATCCGTGC GGCAATCGAG AACTCACTCG AATCGGTGCT GTCGGTCGGC
GGCACACCCA CCTGGACGTT GTCCAACCAC GATGTGGAAC GTGAGGTCAC CCGTTACGGC
GGTGACGATC TCACGCTCGG TGTCCATCGT GCACGCGCCA TGCTGCTCGT CGAGATGGCC
CTGCCGGGCA GTGTTTTCAT CTACAACGGC GCCGAACTCG GCCTGCCCAA CGTGGATCTG
CCCGACGACG CGCTGACCGA TCCTGTGTGG GAGCGCTCAG GTCACACCGA ACGCGGCCGC
GACGGATGCC GCGTTCCACT GCCGTGGGAG GGCACCGCAC CGCCGTTCGG CTTCTCCACT
GCCGACACGA CCTGGCTTCC GATCCCCGAC TCGTGGGCGC CGTTGACCGT CGAGGCTCAG
CTCGAAGATG TGCACTCGAC ACTGTCGCTC TACCGCCAGG CCATCGAAAT GCGTTATGAG
CGAGAAGAAT TCACCGGTGA CACGGTCGAA TGGTATGACG CACCGCCGGG GTGTCTGGCG
TTCCGCCGGT CGCAGGGGCA TCTCATCTGC GCACTCAACG CGAGCGATGC ACCGGTCCCG
CTGCCGCCGG GCGAACTGCT GCTCACGAGC ATTCCGCTCG TCGAGGGACA GCTACCACCG
AACTCGGCGG CGTGGCTGAT CTGA
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| Protein sequence | MSVAQDEPVA EPGAEVRTDE PGIEGVAEPE AEAPTDETGH PEFADDTPAT AAPPPPPGAG
QLDPDNTHWW RSAVFYQIYP RSFSDLDGDG VGDLAGIIDK LGYLELLGVD ALWLSPIMRS
PMADHGYDVA DPRDIDPLFG DVETFDALIA EAHDRDIRVT MDLVPNHTSD QHPWFVAALA
GEPDGPERAR YIFRDGLGDN GDDPPNNWHS VFGGPAWTRV TEADGSPGQW YLHIFAAEQP
DLNWENPEVF ADLETTLRFW LDRGVDGFRI DVAHGMAKPA DLPDMDLTNT TLLQNDDDDP
RFNNYAVHEI HRRIRKVIDE YPGAANVGEI WVDDNERFAE YLRPDELHLG FNFRLAKADF
DPAAIRAAIE NSLESVLSVG GTPTWTLSNH DVEREVTRYG GDDLTLGVHR ARAMLLVEMA
LPGSVFIYNG AELGLPNVDL PDDALTDPVW ERSGHTERGR DGCRVPLPWE GTAPPFGFST
ADTTWLPIPD SWAPLTVEAQ LEDVHSTLSL YRQAIEMRYE REEFTGDTVE WYDAPPGCLA
FRRSQGHLIC ALNASDAPVP LPPGELLLTS IPLVEGQLPP NSAAWLI
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