| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1771 |
|---|
| Symbol | |
|---|
| ID | 8551120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 1849025 |
|---|
| End bp | 1850395 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_003272923 |
|---|
| Protein GI | 262201715 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAA CCGACCAGCC CACCCTCGGC GCGCGCAGTG CAGCGCACCT GTGGGGCCAT
TTCGCCCGCC ACGGCAACGG GATTCGCCCG CCGGTCATCA CCCGCGGCGA CGGTGTCCGC
ATCTTCGACG ACACCGGGCG CAGCTACCTC GACGGCCTGT CGGGGCTCTT CGTCGTGCAG
GTCGGACACG GCCGTGACGA GCTGGCGCAG GCCGCCGCAC GACAGGCCAA AGAACTGGCA
TTCTTTCCGC TCTGGTCCTA TGCCACCCCA CCGGCGATCG AACTCGCCGA GCGGCTCGCG
GCCTACGCAC CCGGTGACCT CAACCGCGTC TTCTTCACCA CCGGCGGCGG CGAAGCGGTG
GAGTCGGCGT GGAAACTGGC CAAGCAGTAC TTCAAGCTGA CCGGGAAACC CGGGAAACAC
AAGGTGATCT CCCGGGCGGT CGCCTACCAC GGCACGCCGC AGGGCGCATT GGCGATCACC
GGCGTACCGG CCCTCAAACA ACCCTTCGAG CCGCTCACCC CGGGTGCGTT CCGGGTGCCC
AACACCAACC TGTATCGCGC GCCCGACGAC ATGTCGACAG ACCCGAAGAA GTTCGGCAGG
TGGGCCGCCG ACCGTATAGC GGAAGCCATC GAGTTCGAGG GACCCGACAC CGTCGCCGCG
GTCTTCCTGG AACCGGTGCA GAACGCCGGC GGCTGCTTTC CGCCCCCGCC GGGCTACTTC
GACCGGGTGC GCGAGATTTG CGACGAGTAC GACGTCCTGT TGGTCTCTGA CGAGGTGATC
TGCGCCTTCG GCCGCATCGG TTCCATGCTC GCCTGCGACG ACTTCGGATA CGTGCCCGAC
ATCATCACCT GCGCGAAAGG CATGACGTCG GGCTACTCAC CGATCGGCGC GATGATCGCT
TCGGACAGAC TCTTCGAACC GTTCAACGAC GGGACGACGT CGTTCCCGCA CGGTTACACC
TTCGGCGGTC ACCCGGTATC CGCAGCCGTC GCCCTGGCCA ATCTCGACAT CTTCGAACGT
GAGGGCCTCA ACGACCACGT CAAGGCCACC GCACCCGCGT TCCGCGCGAC CCTGCAGAAA
CTCCATGACC TGCCCATCGT CGGCGACGTC CGCGGCGAGG GCTTCTTCCA CGCCATCGAG
CTCGTCAAGG ACAAGACCAC CAAGGAGTGC TTCTCCGACG CCGAGTCGGA ACGGATTCTG
CGCGGATTCC TGTCCGGGGC GCTGTTCGAC GCCGGACTGT ACTGTCGCGC GGACGACCGG
GGCGACCCCG TCGTCCAGCT GGCTCCGCCC CTGATCGCCG GGCAGGCCGA GTTCGACGAG
ATCGAGCAGA TCCTCCGGCA GGTTCTCGGC GAGGCTCACG CTCTGCTCTG A
|
|---|
| Protein sequence | MTPTDQPTLG ARSAAHLWGH FARHGNGIRP PVITRGDGVR IFDDTGRSYL DGLSGLFVVQ
VGHGRDELAQ AAARQAKELA FFPLWSYATP PAIELAERLA AYAPGDLNRV FFTTGGGEAV
ESAWKLAKQY FKLTGKPGKH KVISRAVAYH GTPQGALAIT GVPALKQPFE PLTPGAFRVP
NTNLYRAPDD MSTDPKKFGR WAADRIAEAI EFEGPDTVAA VFLEPVQNAG GCFPPPPGYF
DRVREICDEY DVLLVSDEVI CAFGRIGSML ACDDFGYVPD IITCAKGMTS GYSPIGAMIA
SDRLFEPFND GTTSFPHGYT FGGHPVSAAV ALANLDIFER EGLNDHVKAT APAFRATLQK
LHDLPIVGDV RGEGFFHAIE LVKDKTTKEC FSDAESERIL RGFLSGALFD AGLYCRADDR
GDPVVQLAPP LIAGQAEFDE IEQILRQVLG EAHALL
|
|---|
| |