Gene Gbro_1578 details

Gene Information

• Locus tag: Gbro_1578
• ID: 8550926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 1644430
• End bp: 1645125
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 69%
• Product: regulatory protein TetR
• Protein accession: YP_003272745
• Protein GI: 262201537

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.358729
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGAGCC GGACGCGACA CTCGACCCAG CGCGAGACGC AGTCGCGGGC CGACAAGAAG 
AATCAGACCC GGCAGGCGCT GCTCGACACC ACCATGACGC TGGTCGGCGA CCGCAGTTTC 
GGCAGCATCA GCCTGCGGGA GGTCGCGCGC GGCGCGGGAA TCGTGCCAAC CGCCTTCTAC 
CGGCACTTCG CCTCGATGGA AGACCTCGGC GTCACCCTCG TCGAGGACTC GATGCGGGTG 
CTGCGCCGGA CCCTGCGTGA GGGTCGACGC GATCTCGCGT CCCGGCAGGC ACTGCCGACG 
GCCCAGAGTT CACTGGCCAT CCTGTTGCGG CATGTCCGTG AGAACGAGCC CGCCTTCCGG 
TTCCTCGTTC GCGAGCAGCA TGGCGGGATC GCCGAGGTGC GCCGCGCCAT CGACACCGAG 
CTGCGGCTGT TCGCCAAGGA ACTCGCCATC GATCTCGCCC GGATGCCCGA CCTCGCGCGA 
TGGGACGCCG AGGATCTCGA ACTCGCCGCC GAGCTCATCG TGACGATCAT GCTGACCGCG 
GTGGCCGACC TGCTCGACGG TGAGTACCGG GGCCGCGTCG CCGAGCGTGA GGTGGTCGAA 
CGCACCGAAC GCCAACTGGT CATGGTCTTC CTCGGCATGG GGCAGTGGAA GACAGGCGAG 
GGGCGAACAG GCGCGGCGCG AGCAGCCGAA TCCTGA 

 

Protein sequence

MVSRTRHSTQ RETQSRADKK NQTRQALLDT TMTLVGDRSF GSISLREVAR GAGIVPTAFY 
RHFASMEDLG VTLVEDSMRV LRRTLREGRR DLASRQALPT AQSSLAILLR HVRENEPAFR 
FLVREQHGGI AEVRRAIDTE LRLFAKELAI DLARMPDLAR WDAEDLELAA ELIVTIMLTA 
VADLLDGEYR GRVAEREVVE RTERQLVMVF LGMGQWKTGE GRTGAARAAE S