| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1065 |
|---|
| Symbol | |
|---|
| ID | 8550401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 1121557 |
|---|
| End bp | 1122474 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_003272267 |
|---|
| Protein GI | 262201059 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.012185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC GAGACAGGTT GTTGGTACTG GGGTATCACA ACATCGAGGG AACCTGGTGC
TGGCCGGCCA GACCGCGAAT GGGTGAGCGG CGATTTGGCG AACAGATGCG GATACTGTCC
AGGGTCGCCA CCGTCGTCGA TCTGAGATCG GCACTCGACA CCCTGGCGTC GGGAAGCGCC
CTCCCACCGC GTGCGGTGGC ACTCACTTTC GATGACGGTT ACCGCGACAA CCTCACCGTG
GCCGCTCCCA TCCTTCGTCG GTGGGGTATG TGCGGCACCA TCTACTTGGT CCCGGGGCTG
CTCGACCGCA GTGTCCACGC GTGGTGGGAA CGACTCGGCT GGGCCATCGC CGGCACCGCG
GCCAGAACGC TTCATTACGA CGGTCGGGAG TACCGGATCG GCGATCCGGC ACAGCGGCTG
TACGCCCAGC GCCACATCGA GGGAGACGTC AAGCACCTCG ATCATGCCAC TCGCACGGCC
CGGATCGAAG ACTTGGTCGA CCAGCTCGCA CCGACCACCC GCTACGGGGC GGATCGTCTG
TTCCTGGACT GGGATTCGGC CGCAGATCTG GCCCGTGCGG GTCTCACCGT CGGATCGCAC
ACCATGGAAC ATCCGATCTT GGCCAGGGAA TCCGCCGAGA CCCAACGCCG CAGCCTCACT
GAATCCAGGC AGATCCTGCA GGATCGGCTC GGCGACGAGG TTGCCACCCT GGCGTATCCG
AACGGAACTC GCGCAGACTA TGATCCAACG ACGCTGCAAG CCGTCGCCGA TGCCGGCTAC
TCGTACGCGG TGACCACCTG GGGCGGCCGG GTCAGCTGTG CAGACCCCCC ATTCGAGATC
TCACGGCACC TCGTCTCGCC AGATATGTCA CCGATGCGCT TCGCCGCCTC CCTCGCCAAA
CGTTTCCTCC GCGACTGA
|
|---|
| Protein sequence | MTRRDRLLVL GYHNIEGTWC WPARPRMGER RFGEQMRILS RVATVVDLRS ALDTLASGSA
LPPRAVALTF DDGYRDNLTV AAPILRRWGM CGTIYLVPGL LDRSVHAWWE RLGWAIAGTA
ARTLHYDGRE YRIGDPAQRL YAQRHIEGDV KHLDHATRTA RIEDLVDQLA PTTRYGADRL
FLDWDSAADL ARAGLTVGSH TMEHPILARE SAETQRRSLT ESRQILQDRL GDEVATLAYP
NGTRADYDPT TLQAVADAGY SYAVTTWGGR VSCADPPFEI SRHLVSPDMS PMRFAASLAK
RFLRD
|
|---|
| |